Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SSAL_RS05405 Genome accession   NC_017594
Coordinates   1193230..1193712 (-) Length   160 a.a.
NCBI ID   WP_014633194.1    Uniprot ID   -
Organism   Streptococcus salivarius 57.I     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1188230..1198712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS05390 (Ssal_01199) lepB 1190144..1190701 (-) 558 WP_013990669.1 signal peptidase I -
  SSAL_RS05395 (Ssal_01200) - 1190823..1192052 (-) 1230 WP_004182598.1 tetratricopeptide repeat protein -
  SSAL_RS05400 (Ssal_01201) - 1192042..1193220 (-) 1179 WP_014633193.1 AI-2E family transporter -
  SSAL_RS05405 (Ssal_01202) mutX 1193230..1193712 (-) 483 WP_014633194.1 8-oxo-dGTP diphosphatase Machinery gene
  SSAL_RS05410 (Ssal_01203) ftsX 1193867..1194796 (-) 930 WP_045001783.1 permease-like cell division protein FtsX -
  SSAL_RS05415 (Ssal_01204) ftsE 1194789..1195481 (-) 693 WP_002885005.1 cell division ATP-binding protein FtsE -
  SSAL_RS05425 (Ssal_01206) queG 1196710..1197828 (-) 1119 WP_014633196.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18847.20 Da        Isoelectric Point: 4.3791

>NTDB_id=40180 SSAL_RS05405 WP_014633194.1 1193230..1193712(-) (mutX) [Streptococcus salivarius 57.I]
MTKLATICYIDNGKELLLLYRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDRPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=40180 SSAL_RS05405 WP_014633194.1 1193230..1193712(-) (mutX) [Streptococcus salivarius 57.I]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTATATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCATATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTATGAGATCTTCAAGTGGATCCTTGAAG
ATAGACCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAATTTAGTAGACAAGACTGTAACTTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712

Multiple sequence alignment