Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | SPNOXC_RS13410 | Genome accession | NC_017592 |
| Coordinates | 494132..494857 (-) | Length | 241 a.a. |
| NCBI ID | WP_167750760.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae OXC141 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 489132..499857
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPNOXC_RS02635 (SPNOXC04860) | - | 489170..489508 (+) | 339 | WP_000682119.1 | LytTR family DNA-binding domain-containing protein | - |
| SPNOXC_RS02640 (SPNOXC04870) | comE/blpR | 489513..490250 (+) | 738 | WP_001219127.1 | response regulator transcription factor | Regulator |
| SPNOXC_RS02645 (SPNOXC04880) | - | 490264..491604 (+) | 1341 | WP_001017622.1 | sensor histidine kinase | - |
| SPNOXC_RS02650 (SPNOXC04890) | blpC | 491646..491801 (-) | 156 | WP_000358813.1 | quorum-sensing system pheromone BlpC | - |
| SPNOXC_RS02655 (SPNOXC04900) | - | 491858..493219 (-) | 1362 | WP_001069092.1 | bacteriocin secretion accessory protein | - |
| SPNOXC_RS13400 | comA/nlmT | 493230..493718 (-) | 489 | WP_307774349.1 | ATP-binding cassette domain-containing protein | Regulator |
| SPNOXC_RS13405 | comA/nlmT | 493702..494142 (-) | 441 | WP_001808911.1 | ATP-binding cassette domain-containing protein | Regulator |
| SPNOXC_RS13410 | comA/nlmT | 494132..494857 (-) | 726 | WP_167750760.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| SPNOXC_RS13415 (SPNOXC04920) | comA/nlmT | 494802..495389 (-) | 588 | WP_000205166.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| SPNOXC_RS02670 (SPNOXC04930) | blpI | 495671..495868 (+) | 198 | WP_001093258.1 | bacteriocin-like peptide BlpI | - |
| SPNOXC_RS02675 | cipB | 496335..496484 (+) | 150 | WP_001808912.1 | bacteriocin-like peptide BlpO | Regulator |
| SPNOXC_RS02680 (SPNOXC04970) | - | 496588..496707 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
| SPNOXC_RS02690 (SPNOXC05000) | - | 497493..497876 (+) | 384 | WP_000877381.1 | hypothetical protein | - |
| SPNOXC_RS02695 (SPNOXC05010) | - | 497928..498617 (+) | 690 | WP_000760526.1 | CPBP family intramembrane glutamic endopeptidase | - |
| SPNOXC_RS02700 (SPNOXC05020) | blpZ | 498659..498907 (+) | 249 | WP_000276499.1 | immunity protein BlpZ | - |
| SPNOXC_RS02705 (SPNOXC05030) | - | 498937..499548 (+) | 612 | WP_000394047.1 | type II CAAX endopeptidase family protein | - |
Sequence
Protein
Download Length: 241 a.a. Molecular weight: 27490.04 Da Isoelectric Point: 4.8430
>NTDB_id=40001 SPNOXC_RS13410 WP_167750760.1 494132..494857(-) (comA/nlmT) [Streptococcus pneumoniae OXC141]
MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSF
FATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVEGVLLAQNPNLFLLSLISIPIYMFIIFSFMKPFEKMNHDV
MQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGNKISSEYPYPMVWRSISHV
E
MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSF
FATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVEGVLLAQNPNLFLLSLISIPIYMFIIFSFMKPFEKMNHDV
MQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGNKISSEYPYPMVWRSISHV
E
Nucleotide
Download Length: 726 bp
>NTDB_id=40001 SPNOXC_RS13410 WP_167750760.1 494132..494857(-) (comA/nlmT) [Streptococcus pneumoniae OXC141]
TTGGTCACTATTATCAATATAGGTGGTTCTTACTATCTCCAAGGAATCTTGGATGAATACATTCCAAATCAGATGAAATC
AACTTTAGGAATCATCTCAGTTGGTCTGGTTATCACCTATATCCTCCAACAAGTCATGAGCTTCTCCAGAGATTATCTCC
TAACCGTTCTGAGTCAGAGATTAAGTATTGATGTGATTTTATCCTATATTCGCCATATTTTTGAACTTCCCATGTCTTTC
TTTGCGACACGTCGTACAGGAGAAATCATTTCACGGTTCACAGATGCTAACTCTATTATAGATGCCTTGGCTTCTACCAT
TCTTTCTCTTTTTCTGGATGTTTCTATTCTGATTCTTGTAGAGGGAGTCTTGCTGGCACAAAACCCTAATCTCTTCCTTC
TTTCTCTTATTTCCATTCCTATATACATGTTCATCATCTTTTCTTTTATGAAGCCTTTCGAAAAAATGAACCATGATGTC
ATGCAAAGTAATTCTATGGTTAGCTCTGCCATTATCGAAGATATCAACGGGATTGAAACTATAAAGTCGCTCACGAGTGA
AGAAAATCGCTATCAAAATATAGACAGCGAATTTGTAGATTATTTGGAAAAATCCTTTAAGCTCAGTAAATATTCTATTT
TACAAACGAGTTTAAAGCAGGGGAACAAAATTAGTTCTGAATATCCTTATCCTATGGTTTGGCGCTCAATTAGTCATGTC
GAGTAA
TTGGTCACTATTATCAATATAGGTGGTTCTTACTATCTCCAAGGAATCTTGGATGAATACATTCCAAATCAGATGAAATC
AACTTTAGGAATCATCTCAGTTGGTCTGGTTATCACCTATATCCTCCAACAAGTCATGAGCTTCTCCAGAGATTATCTCC
TAACCGTTCTGAGTCAGAGATTAAGTATTGATGTGATTTTATCCTATATTCGCCATATTTTTGAACTTCCCATGTCTTTC
TTTGCGACACGTCGTACAGGAGAAATCATTTCACGGTTCACAGATGCTAACTCTATTATAGATGCCTTGGCTTCTACCAT
TCTTTCTCTTTTTCTGGATGTTTCTATTCTGATTCTTGTAGAGGGAGTCTTGCTGGCACAAAACCCTAATCTCTTCCTTC
TTTCTCTTATTTCCATTCCTATATACATGTTCATCATCTTTTCTTTTATGAAGCCTTTCGAAAAAATGAACCATGATGTC
ATGCAAAGTAATTCTATGGTTAGCTCTGCCATTATCGAAGATATCAACGGGATTGAAACTATAAAGTCGCTCACGAGTGA
AGAAAATCGCTATCAAAATATAGACAGCGAATTTGTAGATTATTTGGAAAAATCCTTTAAGCTCAGTAAATATTCTATTT
TACAAACGAGTTTAAAGCAGGGGAACAAAATTAGTTCTGAATATCCTTATCCTATGGTTTGGCGCTCAATTAGTCATGTC
GAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
75.446 |
92.946 |
0.701 |
| comA | Streptococcus mitis SK321 |
70 |
91.286 |
0.639 |
| comA | Streptococcus pneumoniae Rx1 |
70 |
91.286 |
0.639 |
| comA | Streptococcus pneumoniae D39 |
70 |
91.286 |
0.639 |
| comA | Streptococcus pneumoniae R6 |
70 |
91.286 |
0.639 |
| comA | Streptococcus mitis NCTC 12261 |
70 |
91.286 |
0.639 |
| comA | Streptococcus pneumoniae TIGR4 |
69.545 |
91.286 |
0.635 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
67.411 |
92.946 |
0.627 |