Detailed information NTG0039999

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: SPNOXC_RS13400
• Genome accession: NC_017592
• Coordinates: 493230..493718 (-)
• Length: 162 a.a.
• NCBI ID: WP_307774349.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae OXC141
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 488230..498718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPNOXC_RS02630 (SPNOXC04850)	-	488565..488894 (-)	330	WP_000132570.1	hypothetical protein	-
SPNOXC_RS02635 (SPNOXC04860)	-	489170..489508 (+)	339	WP_000682119.1	LytTR family DNA-binding domain-containing protein	-
SPNOXC_RS02640 (SPNOXC04870)	comE/blpR	489513..490250 (+)	738	WP_001219127.1	response regulator transcription factor	Regulator
SPNOXC_RS02645 (SPNOXC04880)	-	490264..491604 (+)	1341	WP_001017622.1	sensor histidine kinase	-
SPNOXC_RS02650 (SPNOXC04890)	blpC	491646..491801 (-)	156	WP_000358813.1	quorum-sensing system pheromone BlpC	-
SPNOXC_RS02655 (SPNOXC04900)	-	491858..493219 (-)	1362	WP_001069092.1	bacteriocin secretion accessory protein	-
SPNOXC_RS13400	comA/nlmT	493230..493718 (-)	489	WP_307774349.1	ATP-binding cassette domain-containing protein	Regulator
SPNOXC_RS13405	comA/nlmT	493702..494142 (-)	441	WP_001808911.1	ATP-binding cassette domain-containing protein	Regulator
SPNOXC_RS13410	comA/nlmT	494132..494857 (-)	726	WP_167750760.1	ABC transporter transmembrane domain-containing protein	Regulator
SPNOXC_RS13415 (SPNOXC04920)	comA/nlmT	494802..495389 (-)	588	WP_000205166.1	cysteine peptidase family C39 domain-containing protein	Regulator
SPNOXC_RS02670 (SPNOXC04930)	blpI	495671..495868 (+)	198	WP_001093258.1	bacteriocin-like peptide BlpI	-
SPNOXC_RS02675	cipB	496335..496484 (+)	150	WP_001808912.1	bacteriocin-like peptide BlpO	Regulator
SPNOXC_RS02680 (SPNOXC04970)	-	496588..496707 (+)	120	WP_000346296.1	PncF family bacteriocin immunity protein	-
SPNOXC_RS02690 (SPNOXC05000)	-	497493..497876 (+)	384	WP_000877381.1	hypothetical protein	-
SPNOXC_RS02695 (SPNOXC05010)	-	497928..498617 (+)	690	WP_000760526.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 162 a.a.
• Molecular weight: 18195.07 Da
• Isoelectric Point: 7.0620

>NTDB_id=39999 SPNOXC_RS13400 WP_307774349.1 493230..493718(-) (comA/nlmT) [Streptococcus pneumoniae OXC141]
MRRHINYLPQQAYIFNGSILENLTLGGNHMISQEDILKACEVAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARAL
LTKSPVLILDEATSGLDVLTEKKVIDNLMSLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGIHQELMQAQGFYHHLF
NK

Nucleotide

• Length: 489 bp

>NTDB_id=39999 SPNOXC_RS13400 WP_307774349.1 493230..493718(-) (comA/nlmT) [Streptococcus pneumoniae OXC141]
TTGCGCCGTCATATTAATTACCTACCCCAACAAGCCTATATCTTTAATGGCTCTATTTTGGAAAACTTAACCTTGGGCGG
TAATCATATGATTAGTCAAGAAGATATTCTAAAAGCTTGTGAAGTAGCTGAAATCCGTCAAGACATTGAAAGAATGCCTA
TGGGCTATCAAACTCAGCTCTCTGATGGAGCTGGTCTATCAGGAGGACAGAAGCAACGAATCGCTCTCGCTCGTGCTCTT
TTAACTAAATCTCCTGTTTTAATACTAGATGAAGCTACTAGCGGTCTTGATGTCTTGACTGAGAAAAAAGTTATAGATAA
TCTTATGTCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGCCGAACGAACCAACCGTGTCATTG
TTCTTGACCAGGGGAAAATCATTGAAGTTGGTATCCACCAAGAGTTAATGCAAGCGCAAGGTTTCTACCATCATCTATTC
AATAAATAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (2-94)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	72.05	99.383	0.716
comA	Streptococcus gordonii str. Challis substr. CH1	70.37	100	0.704
comA	Streptococcus mitis NCTC 12261	68.519	100	0.685
comA	Streptococcus pneumoniae Rx1	68.519	100	0.685
comA	Streptococcus pneumoniae D39	68.519	100	0.685
comA	Streptococcus pneumoniae R6	68.519	100	0.685
comA	Streptococcus mitis SK321	67.901	100	0.679
comA	Streptococcus pneumoniae TIGR4	67.901	100	0.679
rcrQ	Streptococcus mutans UA159	40.645	95.679	0.389