Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   GJE16_RS04445 Genome accession   NZ_CP045931
Coordinates   864659..865309 (+) Length   216 a.a.
NCBI ID   WP_000387331.1    Uniprot ID   A0A0E7VQD3
Organism   Streptococcus pneumoniae strain AUSMDU00010538     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 859659..870309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJE16_RS04400 (GJE16_04400) - 860142..860357 (+) 216 WP_001232082.1 YozE family protein -
  GJE16_RS04405 (GJE16_04405) - 860443..861411 (+) 969 WP_000658183.1 PhoH family protein -
  GJE16_RS04415 (GJE16_04415) - 861604..862104 (+) 501 WP_000566983.1 GNAT family N-acetyltransferase -
  GJE16_RS04420 (GJE16_04420) - 862107..862433 (+) 327 Protein_869 TfoX/Sxy family protein -
  GJE16_RS11020 ald 862734..863845 (-) 1112 Protein_870 alanine dehydrogenase -
  GJE16_RS04440 (GJE16_04440) - 864022..864591 (+) 570 WP_000443744.1 GNAT family N-acetyltransferase -
  GJE16_RS04445 (GJE16_04445) comEA/celA/cilE 864659..865309 (+) 651 WP_000387331.1 ComEA family DNA-binding protein Machinery gene
  GJE16_RS04450 (GJE16_04450) comEC/celB 865293..867533 (+) 2241 WP_000942387.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  GJE16_RS04455 (GJE16_04455) - 867675..867899 (+) 225 WP_001813351.1 hypothetical protein -
  GJE16_RS04460 (GJE16_04460) - 867931..868518 (+) 588 WP_000945253.1 ATP-binding cassette domain-containing protein -
  GJE16_RS04465 (GJE16_04465) - 868522..869703 (+) 1182 WP_000655954.1 hypothetical protein -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23203.57 Da        Isoelectric Point: 5.5171

>NTDB_id=399403 GJE16_RS04445 WP_000387331.1 864659..865309(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain AUSMDU00010538]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGSGTASSISKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=399403 GJE16_RS04445 WP_000387331.1 864659..865309(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain AUSMDU00010538]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGCGGATT
TTTCCTGCTAAAGCCAGCTCCACAAACACCTGTAAAGGAAACGAATTTGCAGGCTGAAGTTGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAGAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGTCAACAGACTGGTTCGGGGACAGCTTCTTCAATAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGGCAAAACAATAGAAAAGCTTAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(76-126)

(151-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E7VQD3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae Rx1

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae D39

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae R6

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

97.685

100

0.977

  comEA/celA/cilE Streptococcus mitis NCTC 12261

96.296

100

0.963

  comEA/celA/cilE Streptococcus mitis SK321

90.741

100

0.907

  comEA Lactococcus lactis subsp. cremoris KW2

43.612

100

0.458

  comEA Bacillus subtilis subsp. subtilis str. 168

41.579

87.963

0.366

  comEA Latilactobacillus sakei subsp. sakei 23K

33.476

100

0.361


Multiple sequence alignment