Detailed information NTG0397249

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: HRD51_RS36395
• Genome accession: NZ_CP054019
• Coordinates: 8257362..8257997 (-)
• Length: 211 a.a.
• NCBI ID: WP_205371212.1
• Uniprot ID: -
• Organism: Streptomyces sp. A1-5
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 8252362..8262997

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRD51_RS36370 (HRD51_35910)	bioB	8252691..8253860 (-)	1170	WP_235095239.1	biotin synthase BioB	-
HRD51_RS36375 (HRD51_35915)	-	8254091..8255305 (+)	1215	WP_235095240.1	8-amino-7-oxononanoate synthase	-
HRD51_RS36380 (HRD51_35920)	-	8255582..8256028 (+)	447	WP_235095241.1	ATP-binding protein	-
HRD51_RS36385 (HRD51_35925)	-	8256161..8256634 (-)	474	WP_205368446.1	NlpC/P60 family protein	-
HRD51_RS36390 (HRD51_35930)	-	8257048..8257356 (-)	309	WP_235096195.1	hypothetical protein	-
HRD51_RS36395 (HRD51_35935)	clpP	8257362..8257997 (-)	636	WP_205371212.1	ATP-dependent Clp protease proteolytic subunit	Regulator
HRD51_RS36400 (HRD51_35940)	-	8258056..8258370 (+)	315	WP_102925207.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
HRD51_RS36405 (HRD51_35945)	-	8258426..8259373 (-)	948	WP_235095242.1	M28 family metallopeptidase	-
HRD51_RS36410 (HRD51_35950)	-	8259906..8260208 (+)	303	WP_039629940.1	urease subunit gamma	-
HRD51_RS36415 (HRD51_35955)	-	8260226..8260531 (+)	306	Protein_7185	urease subunit beta	-
HRD51_RS36420 (HRD51_35960)	-	8260647..8262368 (+)	1722	WP_205368444.1	urease subunit alpha	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 23404.57 Da
• Isoelectric Point: 5.6562

>NTDB_id=397249 HRD51_RS36395 WP_205371212.1 8257362..8257997(-) (clpP) [Streptomyces sp. A1-5]
MLRPTARYVLPEFTERTSYGTRTLDPYSKLLSERIVFLGTPIDDASANDVMAQFVHLEHAAPDQDISLYINSPGGSFTAM
CAIYDTMRYVSCDVETVCLGQAATTAAVLLAAGTPGKRLALPHARMVIHQPSLDEPVQGQTDDLRIRAEELLRTRDKLER
MLAEHTGQPRERIAADLERETFFDAPTAQEYGLVDGLTRGRKRSAPQLVGR

Nucleotide

• Length: 636 bp

>NTDB_id=397249 HRD51_RS36395 WP_205371212.1 8257362..8257997(-) (clpP) [Streptomyces sp. A1-5]
ATGCTGCGGCCGACGGCTCGCTATGTCCTGCCCGAGTTCACCGAGCGCACCAGCTACGGGACCCGGACGCTGGACCCGTA
CTCCAAGCTGCTCAGCGAGCGGATCGTCTTCCTGGGGACCCCCATCGACGACGCCTCCGCCAACGACGTGATGGCCCAGT
TCGTCCACCTTGAGCACGCCGCGCCGGACCAGGACATCTCGCTCTACATCAACTCTCCCGGCGGCTCGTTCACCGCGATG
TGCGCGATCTACGACACGATGCGCTACGTCTCCTGCGACGTGGAGACCGTCTGCCTGGGCCAGGCGGCCACGACGGCGGC
GGTACTGCTGGCCGCCGGCACCCCGGGGAAGCGACTGGCGCTGCCGCACGCGCGGATGGTGATCCACCAGCCGTCGCTCG
ACGAACCGGTCCAGGGCCAGACCGACGACCTCCGGATCCGGGCCGAGGAACTGCTGCGCACCCGCGACAAGCTGGAGCGG
ATGCTGGCCGAGCACACCGGACAGCCCCGGGAGCGGATCGCCGCGGACCTGGAGCGGGAGACCTTCTTCGACGCGCCGAC
CGCCCAGGAGTACGGCCTGGTCGACGGGTTGACCCGCGGTCGCAAGCGGTCCGCGCCGCAGCTCGTCGGGCGGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.677	89.573	0.436
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	46.774	88.152	0.412
clpP	Streptococcus pneumoniae R6	43.316	88.626	0.384
clpP	Streptococcus pneumoniae Rx1	43.316	88.626	0.384
clpP	Streptococcus pneumoniae D39	43.316	88.626	0.384
clpP	Streptococcus pneumoniae TIGR4	43.316	88.626	0.384
clpP	Streptococcus thermophilus LMG 18311	42.781	88.626	0.379
clpP	Streptococcus thermophilus LMD-9	42.781	88.626	0.379
clpP	Streptococcus mutans UA159	41.711	88.626	0.37
clpP	Streptococcus pyogenes JRS4	41.711	88.626	0.37
clpP	Streptococcus pyogenes MGAS315	41.711	88.626	0.37
clpP	Lactococcus lactis subsp. cremoris KW2	41.489	89.1	0.37
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	41.489	89.1	0.37