Detailed information NTG0395503

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: GFB63_RS10935
• Genome accession: NZ_CP045596
• Coordinates: 1172311..1172781 (+)
• Length: 156 a.a.
• NCBI ID: WP_265578820.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain TK-P3A
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1167311..1177781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GFB63_RS06015 (GFB63_06185)	-	1167978..1168517 (+)	540	WP_372585740.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
GFB63_RS06020 (GFB63_06190)	-	1168828..1169385 (+)	558	WP_111679227.1	ECF transporter S component	-
GFB63_RS06025 (GFB63_06195)	-	1169388..1170038 (+)	651	WP_193838187.1	phosphatase PAP2 family protein	-
GFB63_RS06030 (GFB63_06200)	comR	1170233..1171132 (+)	900	WP_111679231.1	helix-turn-helix domain-containing protein	Regulator
GFB63_RS10925	-	1171370..1171666 (+)	297	Protein_1151	cysteine peptidase family C39 domain-containing protein	-
GFB63_RS10930	comA	1171832..1172227 (+)	396	WP_252989162.1	ABC transporter transmembrane domain-containing protein	Regulator
GFB63_RS10935 (GFB63_06210)	comA	1172311..1172781 (+)	471	WP_265578820.1	ABC transporter transmembrane domain-containing protein	Regulator
GFB63_RS06045 (GFB63_06215)	-	1172836..1173405 (+)	570	WP_265578821.1	ATP-binding cassette domain-containing protein	-
GFB63_RS06050 (GFB63_06220)	-	1173512..1173778 (+)	267	WP_228024372.1	DUF805 domain-containing protein	-
GFB63_RS10605	-	1173989..1174468 (-)	480	WP_228024373.1	DUF4153 domain-containing protein	-
GFB63_RS10610	-	1174910..1175281 (-)	372	WP_224107488.1	hypothetical protein	-
GFB63_RS06060 (GFB63_06240)	-	1175686..1176201 (+)	516	WP_024704185.1	AmiS/UreI family transporter	-
GFB63_RS06065 (GFB63_06245)	-	1176226..1176528 (+)	303	WP_100273340.1	urease subunit gamma	-
GFB63_RS06070 (GFB63_06250)	-	1176540..1176851 (+)	312	WP_100273339.1	urease subunit beta	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 18047.92 Da
• Isoelectric Point: 9.6931

>NTDB_id=395503 GFB63_RS10935 WP_265578820.1 1172311..1172781(+) (comA) [Streptococcus thermophilus strain TK-P3A]
MEANSQVNTAVIDDLRGIETLKSLRVEERRYREIEVKFHDYLKKSLSKAKWQLTQDGLKTVVQLVSNVFILWYGAQLVME
GQLSAGQLITYNMLLNYFTTPLINIINLQSKIQQAKVANNCLQEVYVVDKEEKGKLKELSFKQLAFKGVSHRFSYQ

Nucleotide

• Length: 471 bp

>NTDB_id=395503 GFB63_RS10935 WP_265578820.1 1172311..1172781(+) (comA) [Streptococcus thermophilus strain TK-P3A]
ATGGAGGCAAATAGTCAGGTCAATACCGCTGTTATTGATGATTTGCGAGGTATTGAAACCTTAAAATCCTTGAGGGTTGA
GGAAAGACGCTATCGAGAAATTGAGGTGAAATTCCATGACTATTTGAAGAAGTCTTTGTCTAAGGCCAAGTGGCAATTAA
CGCAGGATGGGTTAAAGACAGTGGTTCAGTTAGTTTCTAATGTCTTTATCCTCTGGTATGGGGCACAATTGGTCATGGAA
GGGCAACTATCTGCAGGTCAGTTGATTACCTATAATATGTTGTTGAATTATTTTACAACTCCTTTAATTAATATCATCAA
TCTCCAATCTAAAATTCAGCAAGCCAAAGTCGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGGACAAGGAAGAAAAAG
GAAAACTTAAAGAGTTATCTTTTAAACAACTTGCTTTTAAAGGAGTCAGTCACCGTTTTAGTTATCAGTAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (1-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	52.201	100	0.532
comA	Streptococcus mitis SK321	51.572	100	0.526
comA	Streptococcus pneumoniae Rx1	51.572	100	0.526
comA	Streptococcus pneumoniae D39	51.572	100	0.526
comA	Streptococcus pneumoniae R6	51.572	100	0.526
comA	Streptococcus pneumoniae TIGR4	51.572	100	0.526
comA	Streptococcus gordonii str. Challis substr. CH1	51.572	100	0.526
comA/nlmT	Streptococcus mutans UA159	46.541	100	0.474