Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   GE021_RS10280 Genome accession   NZ_CP053792
Coordinates   2124731..2124913 (-) Length   60 a.a.
NCBI ID   WP_164407697.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_77_1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 2119731..2129913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS10265 (GE021_010255) - 2120261..2120407 (-) 147 WP_003045707.1 hypothetical protein -
  GE021_RS10270 (GE021_010260) nrdD 2120672..2122870 (-) 2199 WP_125073919.1 anaerobic ribonucleoside-triphosphate reductase -
  GE021_RS10275 (GE021_010265) - 2122968..2124527 (-) 1560 WP_125073918.1 DUF2079 domain-containing protein -
  GE021_RS10280 (GE021_010270) prx 2124731..2124913 (-) 183 WP_164407697.1 Paratox Regulator
  GE021_RS10285 (GE021_010275) sda1 2125120..2126301 (+) 1182 WP_164407699.1 streptodornase Sda1 -
  GE021_RS10290 (GE021_010280) - 2126474..2126953 (-) 480 WP_159323069.1 hypothetical protein -
  GE021_RS10295 (GE021_010285) - 2126940..2127233 (-) 294 WP_159323070.1 hypothetical protein -
  GE021_RS10300 (GE021_010290) - 2127602..2128354 (-) 753 WP_159323071.1 CHAP domain-containing protein -
  GE021_RS10305 (GE021_010295) - 2128356..2128688 (-) 333 WP_003052353.1 phage holin -
  GE021_RS10310 (GE021_010300) - 2128690..2129010 (-) 321 WP_164407578.1 hypothetical protein -
  GE021_RS10315 (GE021_010305) - 2129020..2129181 (-) 162 WP_164406953.1 hypothetical protein -
  GE021_RS10320 (GE021_010310) - 2129207..2129632 (-) 426 WP_099982971.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6980.91 Da        Isoelectric Point: 3.9823

>NTDB_id=394663 GE021_RS10280 WP_164407697.1 2124731..2124913(-) (prx) [Streptococcus canis strain HL_77_1]
MLTYDEFKQAIDDGYITGDTVAIVRKNGQIFDYVLPNEKIRDLEVVTEEKVEEVLMELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=394663 GE021_RS10280 WP_164407697.1 2124731..2124913(-) (prx) [Streptococcus canis strain HL_77_1]
ATGCTAACATACGACGAGTTTAAGCAAGCAATTGATGACGGATATATCACAGGAGACACAGTAGCGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAGAGATTTGGAGGTTGTAACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS8232

80

100

0.8
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

85.714

70

0.6
  prx Streptococcus pyogenes MGAS315

80.952

70

0.567