Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   FPL20_RS20795 Genome accession   NZ_CP045478
Coordinates   3928294..3929088 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain JD-014     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 3923294..3934088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL20_RS20760 (FPL20_GE03952) ephM 3924136..3924996 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  FPL20_RS20765 (FPL20_GE03953) spdL 3924983..3925315 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  FPL20_RS20770 (FPL20_GE03954) yfhK 3925400..3925918 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  FPL20_RS20775 (FPL20_GE03955) yfhJ 3926063..3926332 (-) 270 WP_003243789.1 YfhJ family protein -
  FPL20_RS20780 (FPL20_GE03956) sspK 3926457..3926609 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  FPL20_RS20785 (FPL20_GE03957) yfhI 3926642..3927835 (-) 1194 WP_003243500.1 MFS transporter -
  FPL20_RS20790 (FPL20_GE03959) yfhH 3927978..3928292 (-) 315 WP_003244592.1 YfhH family protein -
  FPL20_RS20795 (FPL20_GE03960) recX 3928294..3929088 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  FPL20_RS20800 (FPL20_GE03961) yfhF 3929177..3930088 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  FPL20_RS20805 (FPL20_GE03962) yfhE 3930143..3930253 (+) 111 WP_003223230.1 YfhE family protein -
  FPL20_RS20810 (FPL20_GE03963) yfhD 3930320..3930511 (+) 192 WP_003233561.1 YfhD family protein -
  FPL20_RS20815 (FPL20_GE03964) yfhC 3930550..3931134 (-) 585 WP_003243940.1 nitroreductase -
  FPL20_RS20820 (FPL20_GE03965) yfhB 3931222..3932103 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  FPL20_RS20825 (FPL20_GE03966) sxzA 3932218..3933249 (-) 1032 WP_003243057.1 iron chelate uptake ABC transporter family permease subunit -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=394530 FPL20_RS20795 WP_003243354.1 3928294..3929088(-) (recX) [Bacillus subtilis strain JD-014]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=394530 FPL20_RS20795 WP_003243354.1 3928294..3929088(-) (recX) [Bacillus subtilis strain JD-014]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment