Detailed information NTG0392229

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: GA636_RS10075
• Genome accession: NZ_CP045135
• Coordinates: 2101681..2102874 (+)
• Length: 397 a.a.
• NCBI ID: WP_160232607.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain XG01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2096681..2107874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GA636_RS10060	-	2096905..2098287 (-)	1383	WP_016658082.1	amino acid permease	-
GA636_RS10065	hppD	2098439..2099497 (-)	1059	WP_104470162.1	4-hydroxyphenylpyruvate dioxygenase	-
GA636_RS10070	-	2100372..2101427 (+)	1056	WP_016658084.1	3-deoxy-7-phosphoheptulonate synthase	-
GA636_RS10075	pilU	2101681..2102874 (+)	1194	WP_160232607.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
GA636_RS10080	-	2102934..2104115 (-)	1182	WP_104500177.1	MFS transporter	-
GA636_RS10085	gcvH	2104371..2104745 (-)	375	WP_005178176.1	glycine cleavage system protein GcvH	-
GA636_RS10090	-	2104814..2105842 (-)	1029	WP_160232459.1	AraC family transcriptional regulator	-
GA636_RS10095	-	2105946..2106395 (-)	450	WP_016658087.1	MaoC family dehydratase	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 44642.03 Da
• Isoelectric Point: 6.3466

>NTDB_id=392229 GA636_RS10075 WP_160232607.1 2101681..2102874(+) (pilU) [Acinetobacter indicus strain XG01]
MYSAELLEDARKFMFHMLSKVVEFGGSDLFITADFPPSIKHQGMMKALGQQALTAEKTKLFAYSLMNEKQRSEFETDLEC
NFAISVPEVSRFRVNVFQQQLHVGMVIRTISAEIPNFSQLKLPESLKHIIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSRHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTEDGKGRRAAVEIMLNTPLISELILKGQFHELKSIMGKS
RELGMQTFDQALFDLYNEGAISYEEAIRNADSMNELRLQIKLKSNRPSEASAAMSFSMLEEPKPEDEDTESAPQQSA

Nucleotide

• Length: 1194 bp

>NTDB_id=392229 GA636_RS10075 WP_160232607.1 2101681..2102874(+) (pilU) [Acinetobacter indicus strain XG01]
ATGTACAGTGCAGAATTACTCGAAGATGCGCGTAAATTTATGTTTCATATGCTCAGCAAAGTGGTTGAGTTTGGGGGATC
AGATTTATTTATTACCGCGGATTTTCCACCGAGCATTAAACATCAGGGCATGATGAAAGCGCTGGGACAACAGGCGCTGA
CCGCAGAAAAAACCAAGCTGTTCGCCTATAGCCTCATGAATGAAAAACAGCGTAGCGAGTTTGAAACTGATCTGGAATGC
AACTTTGCCATTAGTGTGCCGGAGGTATCGCGTTTTCGGGTCAATGTGTTTCAACAGCAGCTGCATGTCGGGATGGTGAT
TCGAACCATTAGCGCGGAAATTCCAAACTTTAGCCAGCTGAAACTGCCGGAATCACTGAAGCATATTATTATGGAAAAGC
GTGGTCTGGTGCTGGTGGTGGGGGGAACCGGTTCAGGTAAATCGACCTCTTTGGCGGCGATGATTGATCATCGTAATGAA
AATTCAGCCGGGCATATTATTACCGTGGAAGACCCGGTGGAATATGTGCACAAGCATAAAAAGTCGATGATTACCCATCG
TGAAGTCGGGGTCGACAGCCATTCCAGGCACAATGCGCTGAAAAATACCTTACGTCAGGCACCGGATGTGATTTTAATTG
GCGAGATCCGCGACACCGAAACCATGGAACATGCGATTGCCTTTGCTGAAACCGGGCATTTATGTTTGGGCACCTTGCAT
GCCAATAACGCCAACCAGACGCTGGACCGGATTATCAACTTTTTCCCGGAAGAGCGCCGTAACCAGTTGCTGATGGATCT
GTCGTCCAATATGAAGGCCATTATTTCCCAGCGTCTGGTGCGTACCGAAGATGGTAAAGGCCGCCGTGCGGCAGTCGAGA
TTATGCTGAATACGCCGCTGATTTCTGAACTGATTTTAAAAGGCCAGTTCCATGAGTTAAAGTCGATTATGGGCAAATCG
CGTGAACTGGGCATGCAGACGTTTGATCAGGCTCTATTTGATTTGTATAACGAAGGCGCGATTTCCTATGAAGAAGCAAT
TCGTAATGCCGATTCGATGAATGAATTGCGCTTACAGATTAAATTGAAAAGTAACCGGCCAAGCGAAGCTTCGGCAGCTA
TGAGCTTTAGCATGCTGGAAGAGCCAAAACCGGAAGATGAAGATACGGAATCTGCTCCTCAACAGAGTGCTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (117-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.568	93.199	0.537
pilU	Acinetobacter baylyi ADP1	54.42	91.184	0.496
pilU	Vibrio cholerae strain A1552	52.663	85.139	0.448
pilT	Acinetobacter baumannii strain A118	43.939	83.123	0.365
pilT	Acinetobacter nosocomialis M2	43.939	83.123	0.365
pilT	Acinetobacter baumannii D1279779	43.939	83.123	0.365
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.814	84.131	0.36