Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | F9800_RS19850 | Genome accession | NZ_CP045030 |
| Coordinates | 2715504..2716085 (-) | Length | 193 a.a. |
| NCBI ID | WP_000991620.1 | Uniprot ID | A0A9W5QUF9 |
| Organism | Bacillus thuringiensis strain JW-1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2710504..2721085
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F9800_RS19820 (F9800_19855) | - | 2711151..2711651 (-) | 501 | WP_057187477.1 | HIT family protein | - |
| F9800_RS19825 (F9800_19860) | - | 2711742..2711909 (-) | 168 | WP_000508401.1 | hypothetical protein | - |
| F9800_RS19830 (F9800_19865) | - | 2712127..2712344 (+) | 218 | Protein_2673 | hypothetical protein | - |
| F9800_RS19835 (F9800_19870) | - | 2712398..2713234 (-) | 837 | WP_001059837.1 | ABC transporter permease | - |
| F9800_RS19840 (F9800_19875) | - | 2713227..2714432 (-) | 1206 | WP_000370608.1 | quaternary amine ABC transporter ATP-binding protein | - |
| F9800_RS19845 (F9800_19880) | - | 2714604..2715461 (+) | 858 | WP_001227626.1 | glycine betaine ABC transporter substrate-binding protein | - |
| F9800_RS19850 (F9800_19885) | clpP | 2715504..2716085 (-) | 582 | WP_000991620.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| F9800_RS19855 (F9800_19890) | - | 2716107..2716793 (-) | 687 | WP_000337517.1 | RNA polymerase subunit sigma-70 | - |
| F9800_RS19860 (F9800_19895) | - | 2716936..2717256 (+) | 321 | WP_001125391.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| F9800_RS19865 (F9800_19900) | rpiA | 2717261..2717923 (+) | 663 | WP_001049995.1 | ribose 5-phosphate isomerase A | - |
| F9800_RS19870 (F9800_19905) | - | 2718038..2718472 (+) | 435 | WP_001190875.1 | GNAT family N-acetyltransferase | - |
| F9800_RS19875 (F9800_19910) | - | 2718697..2719299 (-) | 603 | WP_000342605.1 | DUF6944 family repetitive protein | - |
| F9800_RS19880 (F9800_19915) | - | 2719307..2719525 (-) | 219 | WP_000337734.1 | hypothetical protein | - |
| F9800_RS19885 (F9800_19920) | - | 2719998..2720462 (+) | 465 | WP_000024965.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21266.48 Da Isoelectric Point: 4.9174
>NTDB_id=391324 F9800_RS19850 WP_000991620.1 2715504..2716085(-) (clpP) [Bacillus thuringiensis strain JW-1]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=391324 F9800_RS19850 WP_000991620.1 2715504..2716085(-) (clpP) [Bacillus thuringiensis strain JW-1]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGCTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAACTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATATTTATATATCAATAGCCCAGGAGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTACAAACGCTATGCATGGGCTTTGCGGCATCATTTGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAGGGGCAAGCAA
CAGAAATTGAAATAACAGCAAAAAGGATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCGCATGATACAGAAAGAGATTATTTTATGACCGCAGAAGAAGCTAAGGAATATGGAATTGTAGA
TGATGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGCTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAACTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATATTTATATATCAATAGCCCAGGAGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTACAAACGCTATGCATGGGCTTTGCGGCATCATTTGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAGGGGCAAGCAA
CAGAAATTGAAATAACAGCAAAAAGGATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCGCATGATACAGAAAGAGATTATTTTATGACCGCAGAAGAAGCTAAGGAATATGGAATTGTAGA
TGATGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
69.11 |
98.964 |
0.684 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.254 |
97.927 |
0.668 |
| clpP | Streptococcus thermophilus LMD-9 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pneumoniae Rx1 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pneumoniae D39 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pneumoniae TIGR4 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pneumoniae R6 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus thermophilus LMG 18311 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pyogenes JRS4 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pyogenes MGAS315 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus mutans UA159 |
54.497 |
97.927 |
0.534 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
53.439 |
97.927 |
0.523 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
51.323 |
97.927 |
0.503 |