Detailed information NTG0390082

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: FSC05_RS06760
• Genome accession: NZ_CP044450
• Coordinates: 1409393..1410586 (+)
• Length: 397 a.a.
• NCBI ID: WP_163143462.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain MMS9-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1404393..1415586

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSC05_RS06745 (FSC05_06770)	-	1404617..1405999 (-)	1383	WP_127801462.1	amino acid permease	-
FSC05_RS06750 (FSC05_06775)	hppD	1406151..1407209 (-)	1059	WP_016658083.1	4-hydroxyphenylpyruvate dioxygenase	-
FSC05_RS06755 (FSC05_06780)	-	1408084..1409139 (+)	1056	WP_104488899.1	3-deoxy-7-phosphoheptulonate synthase	-
FSC05_RS06760 (FSC05_06785)	pilU	1409393..1410586 (+)	1194	WP_163143462.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FSC05_RS06765 (FSC05_06790)	-	1410646..1411827 (-)	1182	WP_127801461.1	MFS transporter	-
FSC05_RS06770 (FSC05_06795)	gcvH	1412083..1412457 (-)	375	WP_005178176.1	glycine cleavage system protein GcvH	-
FSC05_RS06775 (FSC05_06800)	-	1412526..1413554 (-)	1029	WP_005178175.1	helix-turn-helix transcriptional regulator	-
FSC05_RS06780 (FSC05_06805)	-	1413658..1414107 (-)	450	WP_016658087.1	MaoC family dehydratase	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 44686.08 Da
• Isoelectric Point: 6.2356

>NTDB_id=390082 FSC05_RS06760 WP_163143462.1 1409393..1410586(+) (pilU) [Acinetobacter indicus strain MMS9-2]
MYSAELLEDARKFMFHMLSKVVEFGGSDLFITADFPPSIKHQGMMKALGQQALTAEKTKLFAYSLMNEKQRSEFETDLEC
NFAISVPEVSRFRVNVFQQQLHVGMVIRTISAEIPNFSQLKLPESLKHIIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPMEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTEDGKGRRAAVEIMLNTPLISELILKGQFHELKSIMGKS
RELGMQTFDQALFDLYNEGAISYEEAIRNADSMNELRLQIKLKSNRPSEASAAMSFSILEEPKPEDEDTESAPQQSA

Nucleotide

• Length: 1194 bp

>NTDB_id=390082 FSC05_RS06760 WP_163143462.1 1409393..1410586(+) (pilU) [Acinetobacter indicus strain MMS9-2]
ATGTACAGTGCAGAATTACTCGAAGATGCGCGTAAGTTTATGTTTCATATGCTCAGCAAAGTGGTTGAGTTTGGGGGATC
AGATTTATTTATTACCGCGGATTTTCCACCGAGCATTAAACATCAGGGCATGATGAAAGCGCTGGGACAACAGGCGCTGA
CCGCAGAAAAAACCAAGCTGTTTGCCTACAGCCTCATGAATGAAAAACAGCGTAGCGAGTTTGAAACTGATCTGGAATGC
AACTTTGCCATTAGTGTGCCGGAGGTATCGCGTTTTCGGGTCAATGTGTTTCAACAGCAGCTGCATGTCGGGATGGTGAT
TCGAACCATTAGCGCGGAAATTCCAAACTTTAGTCAGCTGAAACTGCCGGAATCGCTGAAGCATATTATTATGGAAAAGC
GTGGTCTGGTGCTGGTGGTGGGGGGAACCGGTTCAGGTAAATCGACCTCTCTGGCGGCGATGATTGATCATCGTAATGAA
AATTCAGCCGGGCATATTATTACCGTGGAAGACCCGATGGAATATGTGCACAAGCATAAAAAGTCGATGATTACCCATCG
CGAAGTCGGGGTCGACAGCCATTCCTGGCACAATGCGCTGAAAAATACCTTACGTCAGGCACCGGATGTAATTTTAATTG
GAGAGATCCGCGACACCGAAACCATGGAACATGCGATTGCCTTTGCCGAAACCGGGCATTTATGTTTGGGCACTTTGCAT
GCCAATAACGCCAACCAGACGCTGGACCGGATTATCAACTTTTTCCCGGAAGAACGCCGTAACCAGCTGCTGATGGATCT
GTCGTCCAATATGAAGGCCATTATTTCCCAGCGTCTGGTGCGTACCGAAGATGGTAAAGGCCGCCGTGCGGCAGTCGAGA
TTATGCTGAATACGCCGCTGATTTCTGAACTGATTTTAAAAGGCCAGTTCCATGAGTTAAAGTCGATTATGGGCAAATCG
CGTGAACTGGGCATGCAGACGTTTGATCAGGCTTTATTTGATCTGTATAACGAAGGTGCAATTTCCTATGAAGAAGCAAT
TCGTAATGCCGACTCGATGAATGAATTGCGCTTGCAGATTAAATTGAAAAGTAACCGGCCAAGCGAAGCTTCGGCAGCTA
TGAGTTTTAGCATACTGGAAGAGCCAAAACCGGAAGATGAAGATACGGAATCTGCTCCTCAACAGAGTGCTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (117-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.568	93.199	0.537
pilU	Acinetobacter baylyi ADP1	54.42	91.184	0.496
pilU	Vibrio cholerae strain A1552	52.663	85.139	0.448
pilT	Acinetobacter baumannii strain A118	43.939	83.123	0.365
pilT	Acinetobacter nosocomialis M2	43.939	83.123	0.365
pilT	Acinetobacter baumannii D1279779	43.939	83.123	0.365
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.814	84.131	0.36