Detailed information NTG0388875

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: F5989_RS08795
• Genome accession: NZ_CP044221
• Coordinates: 1744766..1745380 (+)
• Length: 204 a.a.
• NCBI ID: WP_255262943.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain NCH105
• Function: degradation of ComX; require for competence development (at the early growth phase); repress competence development (at the mid-logarithmic growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1739766..1750380

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F5989_RS08780 (F5989_08950)	-	1741242..1742336 (+)	1095	WP_002273608.1	cystathionine gamma-synthase	-
F5989_RS08785 (F5989_08955)	-	1742351..1743514 (+)	1164	WP_002272971.1	MalY/PatB family protein	-
F5989_RS08790 (F5989_08960)	upp	1743827..1744456 (+)	630	WP_002266834.1	uracil phosphoribosyltransferase	-
F5989_RS08795 (F5989_08965)	clpP	1744766..1745380 (+)	615	WP_255262943.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
F5989_RS08800 (F5989_08970)	-	1745503..1745943 (+)	441	WP_002264032.1	YlbF family regulator	-
F5989_RS08805 (F5989_08975)	-	1745950..1746198 (+)	249	WP_002262674.1	YlbG family protein	-
F5989_RS08810 (F5989_08980)	-	1746306..1747478 (+)	1173	WP_002262675.1	ABC transporter substrate-binding protein	-
F5989_RS08815 (F5989_08985)	-	1747562..1748431 (+)	870	WP_061046365.1	branched-chain amino acid ABC transporter permease	-
F5989_RS08820 (F5989_08990)	-	1748435..1749391 (+)	957	WP_002266832.1	branched-chain amino acid ABC transporter permease	-
F5989_RS08825 (F5989_08995)	-	1749391..1750155 (+)	765	WP_002262678.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22665.10 Da
• Isoelectric Point: 5.3673

>NTDB_id=388875 F5989_RS08795 WP_255262943.1 1744766..1745380(+) (clpP) [Streptococcus mutans strain NCH105]
MELKEKYSMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYINSPGGSVSAG
LAIVDTMNFIKSDVQTIVMGIAASMGTIIASSGAKGKRFMLPNAEYLIHQPMGGTGGGTQQSDMAIAAEQLLKTRKKLEK
ILSDNSGKTVKQIHKDAERDYWMDAKETLKYGFIDEIMENNELK

Nucleotide

• Length: 615 bp

>NTDB_id=388875 F5989_RS08795 WP_255262943.1 1744766..1745380(+) (clpP) [Streptococcus mutans strain NCH105]
ATTGAATTAAAGGAGAAATACAGTATGATTCCTGTAGTTATTGAACAAACGAGCCGTGGTGAACGCTCTTATGATATTTA
TTCACGTCTATTAAAAGATCGTATTATTATGTTGACTGGTCCTGTTGAAGACAATATGGCAAATTCCATTATTGCTCAGT
TACTGTTTCTTGATGCACAAGATAATACCAAAGACATTTATCTTTATATTAATTCACCGGGTGGTTCTGTTTCAGCTGGT
CTTGCTATTGTTGATACGATGAACTTTATTAAGTCTGATGTTCAAACGATTGTTATGGGTATTGCTGCTTCCATGGGAAC
AATCATCGCTTCTAGCGGTGCCAAAGGAAAACGTTTTATGTTACCAAATGCAGAATATCTTATCCATCAGCCAATGGGCG
GTACAGGCGGTGGCACACAGCAGTCTGATATGGCTATTGCTGCCGAACAATTGCTTAAAACACGCAAAAAATTAGAAAAG
ATTCTATCGGATAATTCTGGAAAAACAGTAAAACAAATTCATAAGGATGCTGAACGTGATTATTGGATGGATGCTAAGGA
AACATTAAAGTATGGCTTCATCGATGAAATCATGGAAAATAATGAATTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (19-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus mutans UA159	99.51	100	0.995
clpP	Streptococcus pyogenes JRS4	90.306	96.078	0.868
clpP	Streptococcus pyogenes MGAS315	90.306	96.078	0.868
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.755	96.078	0.843
clpP	Streptococcus thermophilus LMD-9	87.245	96.078	0.838
clpP	Lactococcus lactis subsp. cremoris KW2	87.245	96.078	0.838
clpP	Streptococcus thermophilus LMG 18311	87.245	96.078	0.838
clpP	Streptococcus pneumoniae Rx1	86.154	95.588	0.824
clpP	Streptococcus pneumoniae D39	86.154	95.588	0.824
clpP	Streptococcus pneumoniae R6	86.154	95.588	0.824
clpP	Streptococcus pneumoniae TIGR4	86.154	95.588	0.824
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	94.608	0.544
clpP	Bacillus subtilis subsp. subtilis str. 168	55.838	96.569	0.539