Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   FOB78_RS05955 Genome accession   NZ_CP044090
Coordinates   1179525..1179704 (-) Length   59 a.a.
NCBI ID   WP_000965642.1    Uniprot ID   A0AAW6XV58
Organism   Streptococcus agalactiae strain FDAARGOS_670     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1174525..1184704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB78_RS05915 (FOB78_05915) - 1174806..1176083 (-) 1278 WP_000594360.1 ABC transporter permease -
  FOB78_RS05920 (FOB78_05920) - 1176825..1176986 (+) 162 WP_000508795.1 TM2 domain-containing protein -
  FOB78_RS11870 - 1177159..1178536 (-) 1378 Protein_1131 IS3 family transposase -
  FOB78_RS05945 (FOB78_05945) - 1178542..1178808 (+) 267 WP_001872365.1 hypothetical protein -
  FOB78_RS05950 (FOB78_05950) - 1178844..1179425 (+) 582 WP_025193995.1 site-specific integrase -
  FOB78_RS05955 (FOB78_05955) prx 1179525..1179704 (-) 180 WP_000965642.1 hypothetical protein Regulator
  FOB78_RS11920 - 1179860..1179985 (+) 126 WP_017285425.1 hypothetical protein -
  FOB78_RS05960 (FOB78_05960) - 1180121..1180291 (+) 171 WP_000356856.1 hypothetical protein -
  FOB78_RS05965 (FOB78_05965) - 1180332..1180532 (-) 201 WP_000076715.1 CsbD family protein -
  FOB78_RS05970 (FOB78_05970) - 1180636..1181607 (-) 972 WP_000812952.1 Abi family protein -
  FOB78_RS05975 (FOB78_05975) - 1181940..1182659 (-) 720 WP_000236381.1 peptidoglycan amidohydrolase family protein -
  FOB78_RS05980 (FOB78_05980) - 1182661..1182996 (-) 336 WP_001001742.1 phage holin -
  FOB78_RS05985 (FOB78_05985) - 1182998..1183300 (-) 303 WP_000215499.1 hypothetical protein -
  FOB78_RS05990 (FOB78_05990) - 1183313..1183525 (-) 213 WP_000698337.1 hypothetical protein -
  FOB78_RS05995 (FOB78_05995) - 1183500..1183829 (-) 330 WP_000494205.1 DUF1366 domain-containing protein -

Sequence


Protein


Download         Length: 59 a.a.        Molecular weight: 6842.78 Da        Isoelectric Point: 4.3085

>NTDB_id=387619 FOB78_RS05955 WP_000965642.1 1179525..1179704(-) (prx) [Streptococcus agalactiae strain FDAARGOS_670]
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPHEEVRDDEVVTVESVEEVLRELK

Nucleotide


Download         Length: 180 bp        

>NTDB_id=387619 FOB78_RS05955 WP_000965642.1 1179525..1179704(-) (prx) [Streptococcus agalactiae strain FDAARGOS_670]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTGCCGCACGAGGAAGTGAGAGATGATGAAGTTGTGACAGTTGAGAGTGTAGAAGAGG
TGTTGAGGGAATTGAAGTGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

77.586

98.305

0.763

  prx Streptococcus pyogenes MGAS8232

74.138

98.305

0.729

  prx Streptococcus pyogenes MGAS315

68.966

98.305

0.678

  prx Streptococcus pyogenes MGAS315

93.023

72.881

0.678

  prx Streptococcus pyogenes MGAS315

67.241

98.305

0.661

  prx Streptococcus pyogenes MGAS315

78.049

69.492

0.542

  prx Streptococcus pyogenes MGAS315

76.19

71.186

0.542


Multiple sequence alignment