Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | F3P16_RS01530 | Genome accession | NZ_CP043953 |
| Coordinates | 325855..326316 (+) | Length | 153 a.a. |
| NCBI ID | WP_000993718.1 | Uniprot ID | A0A9P2XM63 |
| Organism | Acinetobacter baumannii strain K09-14 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 320855..331316
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3P16_RS01510 (F3P16_01510) | - | 322244..323131 (+) | 888 | WP_001017320.1 | metal-dependent hydrolase | - |
| F3P16_RS01515 (F3P16_01515) | - | 323262..323852 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| F3P16_RS01520 (F3P16_01520) | - | 323874..324956 (+) | 1083 | WP_049581051.1 | TPM domain-containing protein | - |
| F3P16_RS01525 (F3P16_01525) | - | 324950..325510 (+) | 561 | WP_049581048.1 | TPM domain-containing protein | - |
| F3P16_RS01530 (F3P16_01530) | pilA | 325855..326316 (+) | 462 | WP_000993718.1 | pilin | Machinery gene |
| F3P16_RS01535 (F3P16_01535) | - | 326558..328186 (+) | 1629 | WP_001195771.1 | PglL family O-oligosaccharyltransferase | - |
| F3P16_RS01540 (F3P16_01540) | bfr | 328227..328691 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| F3P16_RS01545 (F3P16_01545) | - | 328936..329130 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| F3P16_RS01550 (F3P16_01550) | - | 329339..329722 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 153 a.a. Molecular weight: 15449.52 Da Isoelectric Point: 4.9218
>NTDB_id=386766 F3P16_RS01530 WP_000993718.1 325855..326316(+) (pilA) [Acinetobacter baumannii strain K09-14]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
Nucleotide
Download Length: 462 bp
>NTDB_id=386766 F3P16_RS01530 WP_000993718.1 325855..326316(+) (pilA) [Acinetobacter baumannii strain K09-14]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACAGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACAGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
64.286 |
100 |
0.647 |
| pilA | Pseudomonas aeruginosa PAK |
43.709 |
98.693 |
0.431 |
| pilA | Vibrio cholerae strain A1552 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae C6706 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.581 |
100 |
0.431 |
| comP | Acinetobacter baylyi ADP1 |
39.744 |
100 |
0.405 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
43.357 |
93.464 |
0.405 |