Detailed information NTG0383597

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: FY406_RS08830
• Genome accession: NZ_CP043405
• Coordinates: 1769041..1769889 (-)
• Length: 282 a.a.
• NCBI ID: WP_003088293.1
• Uniprot ID: -
• Organism: Streptococcus ratti strain ATCC 31377
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1764041..1774889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FY406_RS08820 (FY406_08820)	trmFO	1765287..1766621 (-)	1335	WP_003088289.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
FY406_RS08825 (FY406_08825)	topA	1766837..1768951 (-)	2115	WP_003088291.1	type I DNA topoisomerase	-
FY406_RS08830 (FY406_08830)	dprA	1769041..1769889 (-)	849	WP_003088293.1	DNA-processing protein DprA	Machinery gene
FY406_RS08835 (FY406_08835)	-	1769995..1770543 (-)	549	WP_003088296.1	sugar O-acetyltransferase	-
FY406_RS08840 (FY406_08840)	-	1770595..1771362 (-)	768	WP_003088298.1	ribonuclease HII	-
FY406_RS08845 (FY406_08845)	ylqF	1771349..1772200 (-)	852	WP_003088300.1	ribosome biogenesis GTPase YlqF	-
FY406_RS08850 (FY406_08850)	-	1772377..1772823 (-)	447	WP_003088301.1	OsmC family protein	-
FY406_RS08855 (FY406_08855)	-	1772978..1773943 (-)	966	WP_003088302.1	hypothetical protein	-
FY406_RS08860 (FY406_08860)	-	1774148..1774486 (-)	339	WP_003088305.1	ATP cone domain-containing protein	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31500.46 Da
• Isoelectric Point: 9.8285

>NTDB_id=383597 FY406_RS08830 WP_003088293.1 1769041..1769889(-) (dprA) [Streptococcus ratti strain ATCC 31377]
MDNFQLFKLKKAGLTNLNVLHILAYQKKKGKSLSLRDMAVVSKCRDPLLFIENYKNLKSKELRDEFNRFPSLSILDKDYP
LELKNIYNPPALLFYQGDLELMNRPKLAVVGSRNVSKTGVDSVKKIIRELENRFVIVSGLARGVDTAAHLASLKNGGATI
AVIGAGLDVYYPKENRQLQSYIAKNHLLLSEYAPNSQPLKYHFPERNRIIAGLSRGVVVAEAKIRSGSLITCERALEEGR
DVFAVPGNILDGQSDGCHHLIQEGAKCTTSGMDVLNEYQLRK

Nucleotide

• Length: 849 bp

>NTDB_id=383597 FY406_RS08830 WP_003088293.1 1769041..1769889(-) (dprA) [Streptococcus ratti strain ATCC 31377]
ATGGATAATTTTCAACTATTTAAACTTAAGAAAGCGGGCTTGACCAATCTTAATGTCTTACATATTCTTGCTTATCAGAA
AAAGAAAGGAAAATCCTTATCTTTGCGTGATATGGCAGTTGTTTCCAAATGCAGGGATCCCTTGCTTTTTATAGAGAATT
ATAAAAATCTAAAAAGCAAAGAACTGCGTGATGAGTTTAATCGTTTCCCGTCTTTATCTATATTAGATAAGGACTATCCT
TTAGAACTCAAAAATATTTATAACCCGCCTGCCCTTTTATTTTATCAGGGAGATCTGGAACTCATGAACAGACCCAAGCT
AGCTGTGGTTGGTTCCCGAAATGTCAGCAAAACCGGTGTAGATTCCGTCAAAAAAATTATCCGGGAGTTGGAAAACCGTT
TTGTCATTGTCAGCGGTCTGGCACGCGGCGTTGATACTGCTGCGCACTTAGCCAGTCTAAAAAACGGCGGAGCTACCATT
GCAGTCATCGGCGCAGGACTTGATGTCTATTACCCTAAGGAGAATCGTCAGCTGCAAAGCTATATCGCAAAAAATCATCT
CCTCTTATCAGAGTATGCGCCCAACAGCCAGCCACTCAAGTATCATTTCCCAGAGCGCAATCGCATCATTGCTGGACTTT
CCCGAGGAGTTGTCGTAGCAGAGGCTAAAATCCGTTCAGGCAGTCTGATCACCTGCGAACGAGCATTGGAAGAAGGGCGA
GATGTTTTTGCTGTTCCTGGAAATATTTTAGACGGGCAGTCAGATGGCTGCCATCATCTTATTCAAGAAGGAGCCAAATG
CACTACATCAGGTATGGATGTTCTAAATGAGTATCAACTGAGAAAATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	80.714	99.291	0.801
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.857	99.291	0.624
dprA/cilB/dalA	Streptococcus pneumoniae D39	62.5	99.291	0.621
dprA/cilB/dalA	Streptococcus pneumoniae R6	62.5	99.291	0.621
dprA/cilB/dalA	Streptococcus mitis SK321	62.5	99.291	0.621
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	62.5	99.291	0.621
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	62.5	99.291	0.621
dprA	Lactococcus lactis subsp. cremoris KW2	59.353	98.582	0.585
dprA	Legionella pneumophila strain ERS1305867	45.643	85.461	0.39
dprA	Bacillus subtilis subsp. subtilis str. 168	43.6	88.652	0.387
dprA	Latilactobacillus sakei subsp. sakei 23K	40.154	91.844	0.369