Detailed information NTG0383559

Bioinformatically predicted

Overview

• Name: comR/comR1
• Type: Regulator
• Locus tag: FY406_RS03940
• Genome accession: NZ_CP043405
• Coordinates: 799994..800896 (-)
• Length: 300 a.a.
• NCBI ID: WP_003090206.1
• Uniprot ID: -
• Organism: Streptococcus ratti strain ATCC 31377
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 794994..805896

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FY406_RS03920 (FY406_03920)	-	795302..796009 (+)	708	WP_003090222.1	SDR family NAD(P)-dependent oxidoreductase	-
FY406_RS03925 (FY406_03925)	-	796020..796928 (+)	909	WP_003090220.1	hypothetical protein	-
FY406_RS03930 (FY406_03930)	-	796951..798189 (+)	1239	WP_003090218.1	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	-
FY406_RS10575	-	798379..798507 (+)	129	WP_003090215.1	hypothetical protein	-
FY406_RS10395	-	798539..798679 (+)	141	WP_003090213.1	hypothetical protein	-
FY406_RS03935 (FY406_03935)	-	798690..798881 (+)	192	WP_003090211.1	hypothetical protein	-
FY406_RS10400	-	798878..799024 (+)	147	WP_003090209.1	hypothetical protein	-
FY406_RS03940 (FY406_03940)	comR/comR1	799994..800896 (-)	903	WP_003090206.1	helix-turn-helix transcriptional regulator	Regulator
FY406_RS03945 (FY406_03945)	-	801222..803114 (+)	1893	WP_003090205.1	DUF2207 domain-containing protein	-
FY406_RS03950 (FY406_03950)	-	803165..804010 (+)	846	WP_003090201.1	undecaprenyl-diphosphate phosphatase	-
FY406_RS03955 (FY406_03955)	mecA	804102..804818 (+)	717	WP_003090200.1	adaptor protein MecA	Regulator

Sequence

Protein

• Length: 300 a.a.
• Molecular weight: 34981.27 Da
• Isoelectric Point: 4.4668

>NTDB_id=383559 FY406_RS03940 WP_003090206.1 799994..800896(-) (comR/comR1) [Streptococcus ratti strain ATCC 31377]
MTIKEDLGQRIKDKRNQQQLTQSLLCGDETKLTIRQLQRIEGGQSLPTLEKLEFIADRLGTKIADLLEGSDIQLPDDYWK
LKGQIIKFPTYGDKERLRQKQELIEEIYDKYFDILPEDELLFLDLSENILESSHEKDIPNIEEIYDDAFEQVLKKETFTL
NDYLYMSYFLQKCGKTADYDRVTFKLLEQKLLKQELAADELYNIKFLIAVMEATGVYALHDDYQDLLPLLEKAQRIIDKA
QLLTYKPALLELEAKYYIKVVKDKKRAKELYQQALVMGEILGDSIIIADVKMEMANDGID

Nucleotide

• Length: 903 bp

>NTDB_id=383559 FY406_RS03940 WP_003090206.1 799994..800896(-) (comR/comR1) [Streptococcus ratti strain ATCC 31377]
ATGACAATAAAAGAAGATTTGGGACAGCGGATTAAAGACAAAAGAAATCAACAGCAACTGACACAAAGCCTTTTGTGCGG
AGACGAAACAAAGCTGACCATTCGACAGCTTCAGCGGATTGAGGGCGGGCAGTCTTTGCCGACTCTGGAAAAATTAGAGT
TCATTGCTGATCGCTTAGGAACTAAAATAGCTGATCTACTGGAAGGCAGCGATATCCAACTGCCTGACGATTACTGGAAA
CTAAAGGGGCAGATTATTAAGTTTCCCACTTACGGAGATAAAGAAAGACTCCGGCAAAAGCAGGAGCTAATCGAAGAAAT
TTATGACAAGTACTTTGATATCCTGCCTGAGGATGAGCTACTCTTTTTGGATCTTTCAGAAAATATCCTAGAGAGTTCCC
ACGAGAAAGATATTCCTAACATCGAGGAGATTTACGACGATGCCTTTGAGCAAGTACTCAAGAAAGAGACATTTACTCTT
AATGATTATCTTTATATGAGTTATTTTTTACAGAAGTGCGGAAAAACAGCAGATTATGATCGGGTAACCTTCAAACTGCT
TGAGCAAAAATTGCTCAAACAGGAGTTGGCAGCAGATGAACTTTATAATATTAAATTTTTGATTGCTGTTATGGAGGCAA
CTGGCGTTTATGCCCTTCATGATGATTATCAGGATCTTCTTCCCTTGCTGGAGAAGGCTCAACGGATTATTGATAAGGCT
CAGCTTCTCACTTATAAACCAGCCCTTTTAGAACTTGAAGCCAAATACTACATCAAAGTCGTCAAGGATAAGAAAAGAGC
CAAGGAACTCTACCAGCAAGCCTTGGTGATGGGAGAAATCTTAGGCGACTCTATTATCATTGCAGATGTCAAGATGGAGA
TGGCAAATGATGGGATAGACTAG

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (75-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	73.333	100	0.733
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	69	100	0.69
comR	Streptococcus salivarius strain HSISS4	41.472	99.667	0.413
comR	Streptococcus thermophilus LMD-9	41.137	99.667	0.41
comR	Streptococcus thermophilus LMG 18311	41.137	99.667	0.41
comR	Streptococcus salivarius SK126	40.803	99.667	0.407