Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   GRB95_RS03405 Genome accession   NZ_CP051004
Coordinates   602682..602861 (+) Length   59 a.a.
NCBI ID   WP_000965642.1    Uniprot ID   Q8E0V9
Organism   Streptococcus agalactiae 515     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 597682..607861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GRB95_RS03365 (GRB95_03365) - 598560..598886 (+) 327 WP_000404431.1 DUF1366 domain-containing protein -
  GRB95_RS03370 (GRB95_03370) - 598861..599073 (+) 213 WP_000698337.1 hypothetical protein -
  GRB95_RS03375 (GRB95_03375) - 599086..599388 (+) 303 WP_000215499.1 hypothetical protein -
  GRB95_RS03380 (GRB95_03380) - 599390..599725 (+) 336 WP_001001742.1 phage holin -
  GRB95_RS03385 (GRB95_03385) - 599727..600446 (+) 720 WP_000236381.1 peptidoglycan amidohydrolase family protein -
  GRB95_RS03390 (GRB95_03390) - 600779..601750 (+) 972 WP_000812952.1 Abi family protein -
  GRB95_RS03395 (GRB95_03395) - 601854..602054 (+) 201 WP_000076715.1 CsbD family protein -
  GRB95_RS03400 (GRB95_03400) - 602095..602265 (-) 171 WP_000356856.1 hypothetical protein -
  GRB95_RS10505 - 602401..602526 (-) 126 WP_017285425.1 hypothetical protein -
  GRB95_RS03405 (GRB95_03405) prx 602682..602861 (+) 180 WP_000965642.1 hypothetical protein Regulator
  GRB95_RS10405 - 603142..603531 (-) 390 Protein_590 site-specific integrase -
  GRB95_RS10410 (GRB95_03415) - 603567..603833 (-) 267 WP_001872365.1 hypothetical protein -
  GRB95_RS10415 - 603854..605216 (+) 1363 Protein_592 IS3 family transposase -
  GRB95_RS03440 (GRB95_03440) - 605389..605550 (-) 162 WP_000508795.1 NINE protein -
  GRB95_RS03445 (GRB95_03445) - 606293..607570 (+) 1278 WP_000594361.1 ABC transporter permease -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6842.78 Da        Isoelectric Point: 4.3085

>NTDB_id=382587 GRB95_RS03405 WP_000965642.1 602682..602861(+) (prx) [Streptococcus agalactiae 515]
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPHEEVRDDEVVTVESVEEVLRELK

Nucleotide


Download         Length: 180 bp        

>NTDB_id=382587 GRB95_RS03405 WP_000965642.1 602682..602861(+) (prx) [Streptococcus agalactiae 515]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTGCCGCACGAGGAAGTGAGAGATGATGAAGTTGTGACAGTTGAGAGTGTAGAAGAGG
TGTTGAGGGAATTGAAGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8E0V9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

77.586

98.305

0.763
  prx Streptococcus pyogenes MGAS8232

74.138

98.305

0.729
  prx Streptococcus pyogenes MGAS315

68.966

98.305

0.678
  prx Streptococcus pyogenes MGAS315

93.023

72.881

0.678
  prx Streptococcus pyogenes MGAS315

67.241

98.305

0.661
  prx Streptococcus pyogenes MGAS315

78.049

69.492

0.542
  prx Streptococcus pyogenes MGAS315

76.19

71.186

0.542