Detailed information NTG0382307

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: HEP85_RS03750
• Genome accession: NZ_CP050975
• Coordinates: 955018..955620 (+)
• Length: 200 a.a.
• NCBI ID: WP_168526174.1
• Uniprot ID: A0ABW3XNW2
• Organism: Streptomyces sp. RPA4-2
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 950018..960620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HEP85_RS03725 (HEP85_03895)	-	950686..951702 (+)	1017	WP_369658105.1	zinc-binding alcohol dehydrogenase family protein	-
HEP85_RS03730 (HEP85_03900)	-	951786..952181 (-)	396	WP_168526169.1	nitroreductase/quinone reductase family protein	-
HEP85_RS03735 (HEP85_03905)	-	952342..952824 (-)	483	WP_365219475.1	VOC family protein	-
HEP85_RS03740 (HEP85_03910)	-	953067..954293 (+)	1227	WP_168526170.1	epoxide hydrolase family protein	-
HEP85_RS03745 (HEP85_03915)	clpP	954363..955016 (+)	654	WP_168526172.1	ATP-dependent Clp protease proteolytic subunit	Regulator
HEP85_RS03750 (HEP85_03920)	clpP	955018..955620 (+)	603	WP_168526174.1	ClpP family protease	Regulator
HEP85_RS03755 (HEP85_03925)	-	955650..956135 (-)	486	WP_168526176.1	RodZ family helix-turn-helix domain-containing protein	-
HEP85_RS03760 (HEP85_03930)	-	956397..957176 (+)	780	WP_168526178.1	class I SAM-dependent methyltransferase	-
HEP85_RS03765 (HEP85_03935)	-	957187..957381 (-)	195	Protein_750	DUF664 domain-containing protein	-
HEP85_RS03770 (HEP85_03940)	-	957611..959056 (-)	1446	WP_369657575.1	diacylglycerol kinase family protein	-
HEP85_RS03775 (HEP85_03945)	-	959170..959613 (-)	444	WP_168526182.1	response regulator	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 21655.66 Da
• Isoelectric Point: 5.2728

>NTDB_id=382307 HEP85_RS03750 WP_168526174.1 955018..955620(+) (clpP) [Streptomyces sp. RPA4-2]
MGTYTIPNVVERTPQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSSPESEIALYINSPGGSVTSLMAIY
DTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLGQPASGGRQGTVSDLALQAKEMLRIRSQVEEVLSRH
THHDVTVLRADMDRDKVLTAREAVAYGMADEVLSRRLATV

Nucleotide

• Length: 603 bp

>NTDB_id=382307 HEP85_RS03750 WP_168526174.1 955018..955620(+) (clpP) [Streptomyces sp. RPA4-2]
ATGGGTACGTACACGATTCCGAACGTCGTCGAGCGCACCCCGCAGGGCGAGCGGTCCTACGACGTCTTCAGCCGGCTGCT
CTCGGAGCGGATCATCTTCCTCGGCACCGAGATCGACGACGGGGTCGCCAATGTCGTCATCGCCCAGCTCCTCCATCTGG
AGTCGTCGAGCCCGGAGAGCGAGATCGCCCTCTACATCAACTCGCCGGGTGGTTCGGTCACTTCGCTCATGGCGATCTAC
GACACGATGACATTCGTCCAGGCGCCCATCTCGACCTTCTGCGTCGGGCAGGCGGCGTCGACGGCGGCGGTGCTGCTGGC
CGGAGGCGATCCGGGGCGGCGGTTCGTACTGGAGCACGCGCGGGTGCTGCTCGGCCAGCCCGCGAGCGGTGGCCGCCAGG
GCACCGTCTCCGATCTCGCCCTCCAGGCCAAGGAGATGCTCCGGATCCGCTCCCAGGTCGAGGAGGTCCTGTCCCGGCAC
ACGCACCACGACGTCACGGTGCTGCGCGCGGACATGGACCGCGACAAGGTCCTCACGGCGCGGGAGGCGGTGGCGTACGG
AATGGCCGACGAGGTGCTGAGCCGACGGCTCGCGACGGTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (15-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.677	94.5	0.46
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	45.789	95	0.435
clpP	Streptococcus mutans UA159	41.27	94.5	0.39
clpP	Streptococcus pneumoniae R6	40.104	96	0.385
clpP	Streptococcus pneumoniae Rx1	40.104	96	0.385
clpP	Streptococcus pneumoniae D39	40.104	96	0.385
clpP	Streptococcus pneumoniae TIGR4	40.104	96	0.385
clpP	Streptococcus pyogenes JRS4	40.104	96	0.385
clpP	Streptococcus pyogenes MGAS315	40.104	96	0.385
clpP	Lactococcus lactis subsp. cremoris KW2	39.175	97	0.38
clpP	Streptococcus thermophilus LMG 18311	38.542	96	0.37
clpP	Streptococcus thermophilus LMD-9	38.542	96	0.37
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	37.629	97	0.365