Detailed information    

insolico Bioinformatically predicted

Overview


Name   clpP   Type   Regulator
Locus tag   BACI_RS13705 Genome accession   NC_014335
Coordinates   2588843..2589424 (-) Length   193 a.a.
NCBI ID   WP_000991625.1    Uniprot ID   A0A2A8KY00
Organism   Bacillus cereus biovar anthracis str. CI     
Function   degradation of ComK; degradation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 2583843..2594424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACI_RS13675 (BACI_c27460) - 2583858..2584694 (-) 837 WP_000557583.1 PP2C family serine/threonine-protein phosphatase -
  BACI_RS13680 (BACI_c27470) - 2584678..2585169 (-) 492 WP_002021523.1 HIT family protein -
  BACI_RS13685 (BACI_c27480) - 2585270..2585437 (-) 168 WP_002053336.1 hypothetical protein -
  BACI_RS13690 (BACI_c27490) - 2585734..2586570 (-) 837 WP_001084757.1 proline/glycine betaine ABC transporter permease -
  BACI_RS13695 (BACI_c27500) - 2586563..2587768 (-) 1206 WP_000370609.1 glycine betaine/L-proline ABC transporter ATP-binding protein -
  BACI_RS13700 (BACI_c27510) - 2587940..2588797 (+) 858 WP_001227635.1 glycine betaine ABC transporter substrate-binding protein -
  BACI_RS13705 (BACI_c27520) clpP 2588843..2589424 (-) 582 WP_000991625.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP Regulator
  BACI_RS13710 (BACI_c27530) - 2589446..2590132 (-) 687 WP_000337495.1 RNA polymerase subunit sigma-70 -
  BACI_RS13715 (BACI_c27540) - 2590275..2590595 (+) 321 WP_001125380.1 2Fe-2S iron-sulfur cluster-binding protein -
  BACI_RS13720 (BACI_c27550) rpiA 2590600..2591262 (+) 663 WP_000364536.1 ribose 5-phosphate isomerase A -
  BACI_RS13725 (BACI_c27560) - 2591370..2591804 (+) 435 WP_000555719.1 GNAT family N-acetyltransferase -
  BACI_RS13730 (BACI_c27570) - 2591935..2593302 (-) 1368 WP_001065253.1 lytic polysaccharide monooxygenase -
  BACI_RS13735 (BACI_c27580) - 2593739..2594257 (-) 519 WP_000720566.1 DNA topology modulation protein -

Sequence


Protein


Download         Length: 193 a.a.        Molecular weight: 21178.42 Da        Isoelectric Point: 5.0776

>NTDB_id=37916 BACI_RS13705 WP_000991625.1 2588843..2589424(-) (clpP) [Bacillus cereus biovar anthracis str. CI]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK

Nucleotide


Download         Length: 582 bp        

>NTDB_id=37916 BACI_RS13705 WP_000991625.1 2588843..2589424(-) (clpP) [Bacillus cereus biovar anthracis str. CI]
TTGAATGCAATTCCATATGTTGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGTATTGTTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCAGGCGGATCAACGACAGCAGGTTTTGCCATATTAGATACG
ATGAATTTAATCAAACCAGACGTGCAAACGCTATGCATGGGCTTTGCAGCATCATTTGGTGCATTGCTATTATTATCAGG
TGCAAAAGGAAAACGGTTTGCACTCCCAAATAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCGA
CGGAAATTGAAATCACAGCAAAAAGGATTTTAAAGTTAAAACATGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAG

Domains


Predicted by InterproScan.

(14-192)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A8KY00

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpP Bacillus subtilis subsp. subtilis str. 168

68.063

98.964

0.674

  clpP Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

66.667

97.927

0.653

  clpP Streptococcus thermophilus LMD-9

54.688

99.482

0.544

  clpP Streptococcus pneumoniae Rx1

54.688

99.482

0.544

  clpP Streptococcus thermophilus LMG 18311

54.688

99.482

0.544

  clpP Streptococcus pneumoniae D39

54.688

99.482

0.544

  clpP Streptococcus pneumoniae R6

54.688

99.482

0.544

  clpP Streptococcus pneumoniae TIGR4

54.688

99.482

0.544

  clpP Streptococcus pyogenes MGAS315

55.556

97.927

0.544

  clpP Streptococcus pyogenes JRS4

55.556

97.927

0.544

  clpP Streptococcus mutans UA159

53.439

97.927

0.523

  clpP Lactococcus lactis subsp. cremoris KW2

51.852

97.927

0.508

  clpP Lactococcus lactis subsp. lactis strain DGCC12653

49.735

97.927

0.487


Multiple sequence alignment