Detailed information NTG0378923

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: HB733_RS28145
• Genome accession: NZ_CP050330
• Coordinates: 6074354..6075847 (+)
• Length: 497 a.a.
• NCBI ID: WP_023122421.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain DVT779
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 6069354..6080847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HB733_RS28115 (HB733_28180)	-	6069497..6070411 (-)	915	WP_003118059.1	fimbrial protein	-
HB733_RS28120 (HB733_28185)	sutA	6070826..6071143 (-)	318	WP_003098240.1	transcriptional regulator SutA	-
HB733_RS28125 (HB733_28190)	-	6071221..6071646 (-)	426	WP_003096441.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
HB733_RS28130 (HB733_28195)	-	6071907..6073235 (-)	1329	WP_003098243.1	ammonium transporter	-
HB733_RS28135 (HB733_28200)	glnK	6073275..6073613 (-)	339	WP_003096476.1	P-II family nitrogen regulator	-
HB733_RS28140 (HB733_28205)	-	6074053..6074313 (+)	261	WP_003096478.1	accessory factor UbiK family protein	-
HB733_RS28145 (HB733_28210)	comM	6074354..6075847 (+)	1494	WP_023122421.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
HB733_RS28150 (HB733_28215)	betT	6075972..6077957 (+)	1986	WP_003096496.1	choline BCCT transporter BetT	-
HB733_RS28155 (HB733_28220)	pchP	6078000..6079049 (-)	1050	WP_003110458.1	phosphorylcholine phosphatase	-
HB733_RS28160 (HB733_28225)	-	6079200..6080117 (-)	918	WP_174817523.1	LysR substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 53097.06 Da
• Isoelectric Point: 7.9587

>NTDB_id=378923 HB733_RS28145 WP_023122421.1 6074354..6075847(+) (comM) [Pseudomonas aeruginosa strain DVT779]
MSLAIVHSRAQIGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGTALDGLECLGELALSGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL
LEIAGHLSGQAPLPPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSGPPGTGKTLLASRLPGLLPALDE
DEALEVAAIHSVASHVPLRHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFERKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLRESTSLQPGHGE
TATAEVSERVGAARQRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLERIDAI
ERRHLAEALQYRAMTST

Nucleotide

• Length: 1494 bp

>NTDB_id=378923 HB733_RS28145 WP_023122421.1 6074354..6075847(+) (comM) [Pseudomonas aeruginosa strain DVT779]
ATGTCCCTGGCGATTGTCCACAGCCGAGCCCAGATCGGCGTCGAAGCCCCCTGCGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCTTCGCTGACCCTGGTCGGCCTGCCGGAAACCGCGGTGCGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAATGCCGGTTTCGACTTCCCCGCGCGGCGCATCACCCTCAACCTCGCCCCCGCCGACCTACCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCACTCGGCATCCTCGCCGCCAGCGGCCAGTTGCCCGGCACCGCCCTCGACGGCCTGGAGTGCCT
CGGCGAACTGGCCCTGTCCGGGGCGATCCGCCCAGTGCGAGGCGTATTGCCGGCCGCGCTGGCGGCGCGCGACGCAAGGC
GCGTTCTGGTGGTACCGAAGGAAAATGCCGAAGAGGCCAGCCTGGCCAGCGGGCTGACGGTGTTCGCCGTGGACCACCTG
CTGGAGATCGCCGGACACCTCTCCGGCCAGGCCCCGCTGCCGCCCTACCAGGCCCGCGGCCTGCTCCGCGCGCCCTTCCC
TTATCCAGACCTGGCCGAGGTCCAGGGCCAGGCCGCCGCCAAGCGCGCCCTGCTGGTGGCCGCCGCCGGCGCGCACAACC
TGTTGCTCAGCGGCCCGCCGGGCACCGGCAAGACCCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGGCGCTCGACGAG
GACGAAGCCCTGGAGGTCGCGGCGATCCATTCGGTGGCCAGCCACGTCCCCCTCAGGCACTGGCCGCAGCGACCGTTCCG
CCAGCCGCACCACTCCGCCTCCGCGCCGGCCCTGGTCGGCGGCGGCAGCCGCCCGCAGCCGGGCGAGATCACCCTGGCGC
ACCAGGGCGTGCTGTTCCTCGACGAACTGCCGGAGTTCGAGCGCAAGGTCCTGGAGGTCCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATTGCCCGGGCCAACGGCCGGGTACGTTTCCCGGCGCGCTTCCAACTGGTGGCGGCGATGAATCCCTG
TCCCTGTGGCTACCTCGGCGATCCCAGTGGCCGCTGCCGCTGCACCCCGGAACAGGTCCAGCGCTACCGGGGCAAGCTGT
CCGGACCGCTGCTCGATCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCAGGACACGGCGAA
ACCGCTACCGCCGAGGTCAGCGAACGGGTGGGCGCCGCACGGCAACGGCAACTGGCCCGCCAGGGCTGCGCCAATGCCCA
TCTCGATCTCCAGGCGATGCACCGCAATTGTGCACTCGCCGAAGCGGACCGCCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTGGCCCGGACGCTGGCCGACCTGGAGCGCATCGATGCCATC
GAACGCCGGCACCTGGCGGAAGCCCTGCAGTATCGGGCAATGACCTCCACGTGA

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	55.186	100	0.567
comM	Vibrio cholerae O1 biovar El Tor strain E7946	56.539	100	0.565
comM	Vibrio cholerae strain A1552	56.539	100	0.565
comM	Vibrio campbellii strain DS40M4	56.539	100	0.565
comM	Glaesserella parasuis strain SC1401	55.378	100	0.559
comM	Acinetobacter baylyi ADP1	53.614	100	0.537
comM	Legionella pneumophila str. Paris	50.301	100	0.505
comM	Legionella pneumophila strain ERS1305867	50.301	100	0.505
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.866	100	0.469
comM	Helicobacter pylori 26695	38.845	100	0.392