Detailed information NTG0378880

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: BAA1790NC_RS14600
• Genome accession: NZ_CP042841
• Coordinates: 3035995..3037113 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain ATCC BAA-1790
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3030995..3042113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAA1790NC_RS14590 (BAA1790NC_2797)	-	3034111..3034803 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
BAA1790NC_RS14595 (BAA1790NC_2798)	pilT	3034930..3035967 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
BAA1790NC_RS14600 (BAA1790NC_2799)	pilU	3035995..3037113 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
BAA1790NC_RS14605 (BAA1790NC_2800)	fur	3037183..3037620 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
BAA1790NC_RS14610 (BAA1790NC_2801)	-	3037732..3038130 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
BAA1790NC_RS14615 (BAA1790NC_2802)	-	3038185..3038508 (-)	324	WP_000442587.1	RnfH family protein	-
BAA1790NC_RS14620 (BAA1790NC_2803)	-	3038508..3039575 (-)	1068	WP_002019572.1	hypothetical protein	-
BAA1790NC_RS14625 (BAA1790NC_2804)	-	3039728..3040183 (-)	456	WP_000782976.1	bacteriohemerythrin	-
BAA1790NC_RS14630 (BAA1790NC_2805)	-	3040436..3041284 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=378880 BAA1790NC_RS14600 WP_000347039.1 3035995..3037113(+) (pilU) [Acinetobacter baumannii strain ATCC BAA-1790]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=378880 BAA1790NC_RS14600 WP_000347039.1 3035995..3037113(+) (pilU) [Acinetobacter baumannii strain ATCC BAA-1790]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395