Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   FR761_RS04310 Genome accession   NZ_CP042556
Coordinates   925482..925892 (+) Length   136 a.a.
NCBI ID   WP_002017231.1    Uniprot ID   N9KEH5
Organism   Acinetobacter baumannii strain E47     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 920482..930892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FR761_RS04295 (FR761_04295) - 921471..923777 (+) 2307 WP_000259108.1 RelA/SpoT family protein -
  FR761_RS04300 (FR761_04300) - 923822..924595 (-) 774 WP_000682841.1 SDR family oxidoreductase -
  FR761_RS04305 (FR761_04305) mazG 924707..925513 (+) 807 WP_000359497.1 nucleoside triphosphate pyrophosphohydrolase -
  FR761_RS04310 (FR761_04310) comEA 925482..925892 (+) 411 WP_002017231.1 ComEA family DNA-binding protein Machinery gene
  FR761_RS04315 (FR761_04315) pcnB 926017..927480 (+) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  FR761_RS04320 (FR761_04320) folK 927477..927959 (+) 483 WP_000219216.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  FR761_RS04325 (FR761_04325) panB 928005..928814 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  FR761_RS04330 (FR761_04330) panC 928818..929666 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  FR761_RS04335 (FR761_04335) rapZ 929689..930540 (+) 852 WP_000821671.1 RNase adapter RapZ -
  FR761_RS04340 (FR761_04340) - 930537..930806 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence


Protein


Download         Length: 136 a.a.        Molecular weight: 15654.89 Da        Isoelectric Point: 10.3828

>NTDB_id=378412 FR761_RS04310 WP_002017231.1 925482..925892(+) (comEA) [Acinetobacter baumannii strain E47]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=378412 FR761_RS04310 WP_002017231.1 925482..925892(+) (comEA) [Acinetobacter baumannii strain E47]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGGCAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains


Predicted by InterproScan.

(74-134)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9KEH5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

97.794

100

0.978

  comEA Acinetobacter baumannii D1279779

95.588

100

0.956

  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412


Multiple sequence alignment