Detailed information NTG0377010

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: HBA48_RS08595
• Genome accession: NZ_CP050135
• Coordinates: 1646758..1647375 (+)
• Length: 205 a.a.
• NCBI ID: WP_003789242.1
• Uniprot ID: -
• Organism: Kingella kingae strain ATCC 23331
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1641758..1652375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HBA48_RS08565 (HBA48_08605)	-	1642315..1643679 (-)	1365	WP_223877584.1	3'-5' exonuclease	-
HBA48_RS08580 (HBA48_08620)	-	1644046..1645257 (+)	1212	WP_038310501.1	MFS transporter	-
HBA48_RS08585 (HBA48_08625)	ybeY	1645323..1645835 (+)	513	WP_038310502.1	rRNA maturation RNase YbeY	-
HBA48_RS08590 (HBA48_08630)	-	1645875..1646708 (+)	834	WP_003787359.1	transporter associated domain-containing protein	-
HBA48_RS08595 (HBA48_08635)	clpP	1646758..1647375 (+)	618	WP_003789242.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
HBA48_RS08600 (HBA48_08640)	-	1647461..1647838 (+)	378	WP_003789241.1	hypothetical protein	-
HBA48_RS10850	-	1647845..1648075 (+)	231	WP_243763637.1	hypothetical protein	-
HBA48_RS08605 (HBA48_08645)	-	1648045..1648470 (+)	426	WP_243763650.1	LysE family translocator	-
HBA48_RS08610 (HBA48_08650)	-	1648566..1649510 (+)	945	WP_038318407.1	class I SAM-dependent methyltransferase	-
HBA48_RS08615 (HBA48_08655)	msrAB	1649589..1651163 (-)	1575	WP_003787346.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
HBA48_RS08620 (HBA48_08660)	-	1651262..1651579 (-)	318	WP_003789233.1	hypothetical protein	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22635.98 Da
• Isoelectric Point: 5.0776

>NTDB_id=377010 HBA48_RS08595 WP_003789242.1 1646758..1647375(+) (clpP) [Kingella kingae strain ATCC 23331]
MLDIQNNTLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDQTANLVVAQMLFLESENPDKDIYFYINSPGGSVTAG
MSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFALPNSRVMIHQPLISGGLGGQASDIEIHARELLKLKEKLNQ
MLAEHTGKTLAEVERDTDRDNFMSAQEAIEYGLIDKVITSRNEVA

Nucleotide

• Length: 618 bp

>NTDB_id=377010 HBA48_RS08595 WP_003789242.1 1646758..1647375(+) (clpP) [Kingella kingae strain ATCC 23331]
ATGTTAGACATTCAAAACAACACCTTAATCCCCACCGTGATTGAACAAAGCGGACGTGGCGAACGCGCTTTTGACATTTA
TTCACGCCTGTTAAAAGAGCGCATTATTTTCTTGGTGGGCCCTGTGAACGACCAAACCGCCAATTTGGTTGTGGCGCAAA
TGCTGTTTTTGGAAAGCGAAAACCCCGACAAAGACATTTATTTTTACATCAATAGCCCAGGTGGCAGCGTAACCGCAGGC
ATGAGCATTTATGACACGATGAAATTCATTAAACCCGATGTGCAAACTTTGTGCTTGGGTCAAGCGGCGAGCATGGGCGC
GTTTTTGCTGTCGGCTGGCACAAAAGGCAAGCGTTTCGCCCTGCCCAATAGCCGCGTGATGATTCATCAACCGTTGATTA
GTGGTGGCTTGGGTGGTCAAGCGTCTGATATTGAAATTCATGCGCGTGAGTTATTGAAATTAAAAGAAAAACTGAATCAA
ATGTTAGCAGAACACACAGGCAAAACCCTTGCCGAAGTGGAACGCGACACCGACCGCGATAATTTCATGTCGGCGCAAGA
AGCGATAGAATATGGTTTGATTGATAAGGTGATTACGTCTCGCAACGAAGTCGCATAA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (19-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.063	93.171	0.634
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.368	92.683	0.624
clpP	Streptococcus thermophilus LMD-9	56.25	93.659	0.527
clpP	Streptococcus thermophilus LMG 18311	56.25	93.659	0.527
clpP	Streptococcus pneumoniae D39	55.67	94.634	0.527
clpP	Streptococcus pneumoniae Rx1	55.67	94.634	0.527
clpP	Streptococcus pneumoniae R6	55.67	94.634	0.527
clpP	Streptococcus pneumoniae TIGR4	55.67	94.634	0.527
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	92.683	0.517
clpP	Streptococcus pyogenes JRS4	55.789	92.683	0.517
clpP	Lactococcus lactis subsp. cremoris KW2	55.789	92.683	0.517
clpP	Streptococcus pyogenes MGAS315	55.789	92.683	0.517
clpP	Streptococcus mutans UA159	54.974	93.171	0.512