Detailed information
Bioinformatically predicted
Overview
| Name | prx | Type | Regulator |
| Locus tag | FP512_RS03225 | Genome accession | NZ_CP042002 |
| Coordinates | 574643..574831 (+) | Length | 62 a.a. |
| NCBI ID | WP_000027835.1 | Uniprot ID | A0AAV3JNT7 |
| Organism | Streptococcus agalactiae strain GBS30 | ||
| Function | Inhibit ComR activation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 565897..574601 | 574643..574831 | flank | 42 |
| IS/Tn | 573597..574208 | 574643..574831 | flank | 435 |
Gene organization within MGE regions
Location: 565897..574831
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FP512_RS03185 (FP512_03280) | - | 567276..567437 (-) | 162 | WP_000508794.1 | NINE protein | - |
| FP512_RS03190 (FP512_03285) | - | 568179..569456 (+) | 1278 | WP_000594366.1 | ABC transporter permease | - |
| FP512_RS03195 (FP512_03290) | - | 569466..570122 (+) | 657 | WP_000353149.1 | ABC transporter ATP-binding protein | - |
| FP512_RS03200 (FP512_03295) | - | 570122..571497 (+) | 1376 | Protein_544 | ABC transporter permease | - |
| FP512_RS03205 (FP512_03300) | - | 571594..572247 (+) | 654 | WP_000699093.1 | response regulator transcription factor | - |
| FP512_RS03210 (FP512_03305) | - | 572244..573545 (+) | 1302 | WP_000734168.1 | HAMP domain-containing sensor histidine kinase | - |
| FP512_RS03215 (FP512_03310) | - | 573597..574244 (-) | 648 | Protein_547 | IS3 family transposase | - |
| FP512_RS03220 (FP512_03315) | - | 574422..574601 (+) | 180 | WP_000076709.1 | CsbD family protein | - |
| FP512_RS03225 (FP512_03320) | prx | 574643..574831 (+) | 189 | WP_000027835.1 | hypothetical protein | Regulator |
Sequence
Protein
Download Length: 62 a.a. Molecular weight: 7180.25 Da Isoelectric Point: 4.7815
>NTDB_id=375519 FP512_RS03225 WP_000027835.1 574643..574831(+) (prx) [Streptococcus agalactiae strain GBS30]
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS
Nucleotide
Download Length: 189 bp
>NTDB_id=375519 FP512_RS03225 WP_000027835.1 574643..574831(+) (prx) [Streptococcus agalactiae strain GBS30]
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| prx | Streptococcus pyogenes MGAS315 |
72.222 |
87.097 |
0.629 |
| prx | Streptococcus pyogenes MGAS8232 |
69.091 |
88.71 |
0.613 |
| prx | Streptococcus pyogenes MGAS315 |
66.667 |
87.097 |
0.581 |
| prx | Streptococcus pyogenes MGAS315 |
85 |
64.516 |
0.548 |
| prx | Streptococcus pyogenes MGAS315 |
61.818 |
88.71 |
0.548 |
| prx | Streptococcus pyogenes MGAS315 |
74.359 |
62.903 |
0.468 |
| prx | Streptococcus pyogenes MGAS315 |
78.378 |
59.677 |
0.468 |