Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   FPL17_RS17915 Genome accession   NZ_CP041970
Coordinates   3852209..3852592 (+) Length   127 a.a.
NCBI ID   WP_004652356.1    Uniprot ID   A0A2N0WJ47
Organism   Acinetobacter dispersus strain NCCP 16014     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3847209..3857592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL17_RS17885 (FPL17_18090) - 3847682..3848044 (+) 363 WP_159886589.1 DUF2004 domain-containing protein -
  FPL17_RS17890 (FPL17_18095) - 3848067..3848423 (+) 357 WP_159886591.1 DUF488 domain-containing protein -
  FPL17_RS17895 (FPL17_18100) - 3848475..3848819 (+) 345 WP_005208695.1 zinc ribbon domain-containing protein YjdM -
  FPL17_RS17900 (FPL17_18105) - 3848971..3849306 (+) 336 WP_005192866.1 YegP family protein -
  FPL17_RS17905 (FPL17_18110) - 3849363..3851078 (-) 1716 WP_159886593.1 proline--tRNA ligase -
  FPL17_RS17910 (FPL17_18115) - 3851276..3851929 (-) 654 WP_159886595.1 hypothetical protein -
  FPL17_RS17915 (FPL17_18120) pilG 3852209..3852592 (+) 384 WP_004652356.1 twitching motility response regulator PilG Regulator
  FPL17_RS17920 (FPL17_18125) - 3852613..3852975 (+) 363 WP_004652355.1 response regulator -
  FPL17_RS17925 (FPL17_18130) - 3853016..3853552 (+) 537 WP_005150072.1 chemotaxis protein CheW -
  FPL17_RS17930 (FPL17_18135) - 3853599..3855683 (+) 2085 WP_005192856.1 methyl-accepting chemotaxis protein -

Sequence


Protein


Download         Length: 127 a.a.        Molecular weight: 14226.35 Da        Isoelectric Point: 4.7278

>NTDB_id=375108 FPL17_RS17915 WP_004652356.1 3852209..3852592(+) (pilG) [Acinetobacter dispersus strain NCCP 16014]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=375108 FPL17_RS17915 WP_004652356.1 3852209..3852592(+) (pilG) [Acinetobacter dispersus strain NCCP 16014]
ATGGAAGATAAATTTCAAAATTTAAAGGTGATGGTGATTGACGATTCAAAAACGATTCGTCGTACAGCTGAGACCTTGTT
GCAACGTGAAGGTTGTGAGGTCATTACTGCTGTTGATGGCTTTGAAGCATTATCAAAAATCGCAGAAGCCAATCCAGATA
TCGTTTTTGTAGACATCATGATGCCTCGTTTAGACGGTTATCAAACCTGTGCATTAATTAAAAATTCTCTAAATTATCAA
AATATTCCAGTGATTATGTTATCAAGCAAAGACGGTTTGTTTGATCAGGCTAAAGGGCGTGTTGTGGGGTCGGATGAATA
TTTAACCAAGCCATTTAGTAAAGATGAGCTGTTAAATGCGATTCGCAACCACGTTAGCGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2N0WJ47

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

97.638

100

0.976

  vicR Streptococcus mutans UA159

42.735

92.126

0.394

  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37


Multiple sequence alignment