Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | FK537_RS14860 | Genome accession | NZ_CP041291 |
| Coordinates | 3012228..3013421 (+) | Length | 397 a.a. |
| NCBI ID | WP_045794791.1 | Uniprot ID | A0A6C0Y670 |
| Organism | Acinetobacter indicus strain 94-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3007228..3018421
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FK537_RS14845 (FK537_14815) | - | 3007452..3008834 (-) | 1383 | WP_016658082.1 | amino acid permease | - |
| FK537_RS14850 (FK537_14820) | hppD | 3008986..3010044 (-) | 1059 | WP_168370186.1 | 4-hydroxyphenylpyruvate dioxygenase | - |
| FK537_RS14855 (FK537_14825) | - | 3010918..3011973 (+) | 1056 | WP_168370187.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| FK537_RS14860 (FK537_14830) | pilU | 3012228..3013421 (+) | 1194 | WP_045794791.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| FK537_RS14865 (FK537_14835) | - | 3013479..3014660 (-) | 1182 | WP_075166577.1 | MFS transporter | - |
| FK537_RS14870 (FK537_14840) | gcvH | 3014916..3015290 (-) | 375 | WP_005178176.1 | glycine cleavage system protein GcvH | - |
| FK537_RS14875 (FK537_14845) | - | 3015359..3016387 (-) | 1029 | WP_005178175.1 | helix-turn-helix transcriptional regulator | - |
| FK537_RS14880 (FK537_14850) | - | 3016491..3016940 (-) | 450 | WP_016658087.1 | MaoC family dehydratase | - |
Sequence
Protein
Download Length: 397 a.a. Molecular weight: 44672.05 Da Isoelectric Point: 6.2356
>NTDB_id=371021 FK537_RS14860 WP_045794791.1 3012228..3013421(+) (pilU) [Acinetobacter indicus strain 94-2]
MYSAELLEDARKFMFHMLSKVVEFGGSDLFITADFPPSIKHQGMMKALGQQALTAEKTKLFAYSLMNEKQRSEFETDLEC
NFAISVPEVSRFRVNVFQQQLHVGMVIRTISAEIPNFSQLKLPESLKHIIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTEDGKGRRAAVEIMLNTPLISELILKGQFHELKSIMGKS
RELGMQTFDQALFDLYNEGAISYEEAIRNADSMNELRLQIKLKSNRPSEASAAMSFSMLEEPKPEDEDTESAPQQSA
MYSAELLEDARKFMFHMLSKVVEFGGSDLFITADFPPSIKHQGMMKALGQQALTAEKTKLFAYSLMNEKQRSEFETDLEC
NFAISVPEVSRFRVNVFQQQLHVGMVIRTISAEIPNFSQLKLPESLKHIIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTEDGKGRRAAVEIMLNTPLISELILKGQFHELKSIMGKS
RELGMQTFDQALFDLYNEGAISYEEAIRNADSMNELRLQIKLKSNRPSEASAAMSFSMLEEPKPEDEDTESAPQQSA
Nucleotide
Download Length: 1194 bp
>NTDB_id=371021 FK537_RS14860 WP_045794791.1 3012228..3013421(+) (pilU) [Acinetobacter indicus strain 94-2]
ATGTACAGTGCAGAATTACTTGAAGATGCGCGTAAATTTATGTTTCATATGCTCAGCAAAGTGGTTGAGTTTGGGGGATC
AGATTTATTTATTACCGCGGATTTTCCACCGAGCATTAAACATCAGGGCATGATGAAAGCGCTGGGACAACAGGCGCTGA
CTGCAGAAAAAACCAAGCTGTTCGCCTACAGCCTCATGAATGAAAAACAGCGTAGCGAGTTTGAAACTGATCTGGAATGC
AACTTTGCCATTAGTGTGCCGGAGGTATCGCGTTTTCGGGTCAATGTGTTTCAACAGCAGCTGCATGTCGGGATGGTGAT
TCGAACCATTAGCGCGGAAATTCCAAACTTTAGCCAGCTGAAACTGCCGGAATCGCTGAAGCATATTATTATGGAAAAGC
GCGGTCTGGTGCTGGTGGTGGGGGGAACCGGTTCAGGTAAATCGACCTCTTTGGCGGCGATGATTGATCATCGTAATGAA
AATTCAGCCGGGCATATTATTACCGTGGAAGACCCGGTGGAATATGTGCACAAGCATAAGAAGTCAATGATTACCCATCG
TGAAGTCGGGGTCGACAGCCATTCCTGGCACAATGCGCTGAAAAATACCTTACGTCAGGCACCGGATGTGATTTTAATTG
GTGAGATCCGCGACACCGAAACCATGGAACATGCGATTGCCTTTGCCGAAACCGGGCATTTATGTTTGGGCACCTTGCAT
GCCAATAACGCCAACCAGACGCTGGACCGGATTATCAACTTTTTCCCGGAAGAGCGCCGTAACCAGCTGCTGATGGATCT
GTCGTCCAATATGAAGGCCATTATTTCCCAGCGTCTGGTGCGTACCGAAGATGGTAAAGGGCGCCGTGCGGCAGTCGAGA
TTATGCTGAATACGCCGCTGATTTCTGAACTGATTTTAAAAGGCCAGTTCCATGAGTTAAAGTCGATTATGGGCAAATCG
CGTGAACTGGGCATGCAGACGTTTGATCAGGCTTTATTTGATCTGTATAACGAAGGTGCAATTTCCTATGAAGAAGCAAT
TCGTAATGCCGACTCGATGAATGAATTGCGCTTACAGATCAAGCTGAAAAGTAACCGGCCAAGCGAAGCTTCGGCAGCTA
TGAGCTTTAGCATGCTGGAAGAACCAAAACCGGAAGATGAAGATACGGAATCTGCTCCTCAACAGAGTGCTTAA
ATGTACAGTGCAGAATTACTTGAAGATGCGCGTAAATTTATGTTTCATATGCTCAGCAAAGTGGTTGAGTTTGGGGGATC
AGATTTATTTATTACCGCGGATTTTCCACCGAGCATTAAACATCAGGGCATGATGAAAGCGCTGGGACAACAGGCGCTGA
CTGCAGAAAAAACCAAGCTGTTCGCCTACAGCCTCATGAATGAAAAACAGCGTAGCGAGTTTGAAACTGATCTGGAATGC
AACTTTGCCATTAGTGTGCCGGAGGTATCGCGTTTTCGGGTCAATGTGTTTCAACAGCAGCTGCATGTCGGGATGGTGAT
TCGAACCATTAGCGCGGAAATTCCAAACTTTAGCCAGCTGAAACTGCCGGAATCGCTGAAGCATATTATTATGGAAAAGC
GCGGTCTGGTGCTGGTGGTGGGGGGAACCGGTTCAGGTAAATCGACCTCTTTGGCGGCGATGATTGATCATCGTAATGAA
AATTCAGCCGGGCATATTATTACCGTGGAAGACCCGGTGGAATATGTGCACAAGCATAAGAAGTCAATGATTACCCATCG
TGAAGTCGGGGTCGACAGCCATTCCTGGCACAATGCGCTGAAAAATACCTTACGTCAGGCACCGGATGTGATTTTAATTG
GTGAGATCCGCGACACCGAAACCATGGAACATGCGATTGCCTTTGCCGAAACCGGGCATTTATGTTTGGGCACCTTGCAT
GCCAATAACGCCAACCAGACGCTGGACCGGATTATCAACTTTTTCCCGGAAGAGCGCCGTAACCAGCTGCTGATGGATCT
GTCGTCCAATATGAAGGCCATTATTTCCCAGCGTCTGGTGCGTACCGAAGATGGTAAAGGGCGCCGTGCGGCAGTCGAGA
TTATGCTGAATACGCCGCTGATTTCTGAACTGATTTTAAAAGGCCAGTTCCATGAGTTAAAGTCGATTATGGGCAAATCG
CGTGAACTGGGCATGCAGACGTTTGATCAGGCTTTATTTGATCTGTATAACGAAGGTGCAATTTCCTATGAAGAAGCAAT
TCGTAATGCCGACTCGATGAATGAATTGCGCTTACAGATCAAGCTGAAAAGTAACCGGCCAAGCGAAGCTTCGGCAGCTA
TGAGCTTTAGCATGCTGGAAGAACCAAAACCGGAAGATGAAGATACGGAATCTGCTCCTCAACAGAGTGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
57.568 |
93.199 |
0.537 |
| pilU | Acinetobacter baylyi ADP1 |
54.42 |
91.184 |
0.496 |
| pilU | Vibrio cholerae strain A1552 |
52.663 |
85.139 |
0.448 |
| pilT | Acinetobacter baumannii strain A118 |
43.939 |
83.123 |
0.365 |
| pilT | Acinetobacter nosocomialis M2 |
43.939 |
83.123 |
0.365 |
| pilT | Acinetobacter baumannii D1279779 |
43.939 |
83.123 |
0.365 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
42.814 |
84.131 |
0.36 |