Detailed information NTG0369242

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: FJM75_RS09865
• Genome accession: NZ_CP041063
• Coordinates: 1928843..1929427 (+)
• Length: 194 a.a.
• NCBI ID: WP_098445023.1
• Uniprot ID: -
• Organism: Bacillus sp. Cs-700
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1923843..1934427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FJM75_RS09830	-	1924604..1925635 (-)	1032	WP_166001688.1	sugar-binding transcriptional regulator	-
FJM75_RS09835	-	1925786..1926022 (-)	237	WP_165997918.1	glutaredoxin family protein	-
FJM75_RS09840	rpoN	1926107..1927126 (-)	1020	WP_165997920.1	RNA polymerase factor sigma-54	-
FJM75_RS09845	-	1927102..1927401 (-)	300	WP_242688789.1	hypothetical protein	-
FJM75_RS09850	-	1927592..1927867 (+)	276	WP_159784943.1	hypothetical protein	-
FJM75_RS09860	-	1928292..1928678 (+)	387	WP_165997922.1	hypothetical protein	-
FJM75_RS09865	clpP	1928843..1929427 (+)	585	WP_098445023.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
FJM75_RS09870	-	1929542..1929796 (-)	255	WP_159784949.1	HPr family phosphocarrier protein	-
FJM75_RS09875	whiA	1930052..1930993 (-)	942	WP_159784952.1	DNA-binding protein WhiA	-
FJM75_RS09880	-	1931034..1932002 (-)	969	WP_098445026.1	YvcK family protein	-
FJM75_RS09885	rapZ	1932004..1932894 (-)	891	WP_159784958.1	RNase adapter RapZ	-
FJM75_RS09890	-	1932940..1933413 (-)	474	WP_224882158.1	8-oxo-dGTP diphosphatase	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 21420.68 Da
• Isoelectric Point: 4.7890

>NTDB_id=369242 FJM75_RS09865 WP_098445023.1 1928843..1929427(+) (clpP) [Bacillus sp. Cs-700]
MVLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGTAIDDNVSNAVVAQLLFLAAEDPDKDISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEPGKRYALPNSEVMIHQPLGGTQGQASDIEIHAKRIIQMREKLNKILSERTGQ
PLETIDRDTDRDRFMEATEAKEYGLIDEVMEKKA

Nucleotide

• Length: 585 bp

>NTDB_id=369242 FJM75_RS09865 WP_098445023.1 1928843..1929427(+) (clpP) [Bacillus sp. Cs-700]
ATGGTTTTAATTCCAACGGTAATTGAACAAACAAACCGCGGTGAAAGAGCGTACGACATTTATTCTCGTCTTCTTAAGGA
TCGCATTATCATGCTAGGAACAGCAATTGACGACAACGTTTCAAACGCTGTAGTCGCTCAGCTTCTTTTCCTTGCTGCAG
AAGATCCTGATAAAGATATCTCACTTTACATTAACAGCCCTGGTGGTTCGATCACAGCAGGTATGGCAATTTACGATACA
ATGCAATTTATCAAGCCGAAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCTTTCCTTCTTGCAGCTGG
TGAGCCTGGGAAGCGTTATGCGCTCCCAAACAGTGAAGTAATGATTCACCAACCGCTCGGTGGTACGCAAGGTCAGGCTT
CTGACATTGAAATTCACGCAAAACGTATCATTCAAATGCGCGAAAAGCTGAACAAAATTCTTTCTGAACGTACAGGTCAA
CCACTTGAAACAATTGATCGCGACACGGATCGTGACCGTTTCATGGAAGCAACAGAAGCGAAAGAGTACGGCTTAATTGA
TGAAGTAATGGAAAAGAAAGCATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	84.737	97.938	0.83
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.492	98.454	0.655
clpP	Streptococcus mutans UA159	56.545	98.454	0.557
clpP	Streptococcus pneumoniae D39	55.67	100	0.557
clpP	Streptococcus pneumoniae R6	55.67	100	0.557
clpP	Streptococcus pneumoniae TIGR4	55.67	100	0.557
clpP	Lactococcus lactis subsp. cremoris KW2	55.67	100	0.557
clpP	Streptococcus pneumoniae Rx1	55.67	100	0.557
clpP	Streptococcus thermophilus LMG 18311	56.316	97.938	0.552
clpP	Streptococcus thermophilus LMD-9	56.316	97.938	0.552
clpP	Streptococcus pyogenes JRS4	54.922	99.485	0.546
clpP	Streptococcus pyogenes MGAS315	54.922	99.485	0.546
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	100	0.541