Detailed information NTG0364838

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: BPGQ101_RS16870
• Genome accession: NZ_CP040514
• Coordinates: 3221812..3222408 (+)
• Length: 198 a.a.
• NCBI ID: WP_024719872.1
• Uniprot ID: A0A2G8ISB7
• Organism: Bacillus altitudinis strain GQYP101
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3216812..3227408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BPGQ101_RS16835 (BPGQ101_16835)	-	3217193..3218083 (-)	891	WP_234879727.1	ABC transporter substrate-binding protein	-
BPGQ101_RS16840 (BPGQ101_16840)	-	3218334..3218798 (-)	465	WP_056702854.1	DinB family protein	-
BPGQ101_RS16845 (BPGQ101_16845)	-	3219221..3219493 (-)	273	WP_056702858.1	hypothetical protein	-
BPGQ101_RS16850 (BPGQ101_16850)	-	3219632..3220378 (-)	747	WP_056702859.1	hypothetical protein	-
BPGQ101_RS20570 (BPGQ101_16855)	-	3220485..3220574 (-)	90	WP_138279274.1	helix-turn-helix domain-containing protein	-
BPGQ101_RS16860 (BPGQ101_16860)	-	3220724..3221263 (-)	540	WP_138279034.1	hypothetical protein	-
BPGQ101_RS16870 (BPGQ101_16870)	clpP	3221812..3222408 (+)	597	WP_024719872.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
BPGQ101_RS16875 (BPGQ101_16875)	-	3222464..3223042 (-)	579	WP_024719873.1	TIGR00730 family Rossman fold protein	-
BPGQ101_RS16880 (BPGQ101_16880)	-	3223179..3223520 (+)	342	WP_017368102.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
BPGQ101_RS16885 (BPGQ101_16885)	-	3223550..3225172 (-)	1623	WP_025208022.1	SulP family inorganic anion transporter	-
BPGQ101_RS16890 (BPGQ101_16890)	-	3225210..3225791 (-)	582	WP_138279035.1	beta-class carbonic anhydrase	-
BPGQ101_RS16895 (BPGQ101_16895)	-	3226345..3227322 (+)	978	WP_234879657.1	2-hydroxyacid dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.00 Da
• Isoelectric Point: 4.6905

>NTDB_id=364838 BPGQ101_RS16870 WP_024719872.1 3221812..3222408(+) (clpP) [Bacillus altitudinis strain GQYP101]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNSEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=364838 BPGQ101_RS16870 WP_024719872.1 3221812..3222408(+) (clpP) [Bacillus altitudinis strain GQYP101]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTATCACAGCTTCTCTTCTTAGAAGCCG
AGGATCCAGAAAAAGATATCTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAATAGTGAAGTGATGATTCACCAACCACTAGGTGGTGCGCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATTCAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A2G8ISB7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	92.929	100	0.929
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.701	97.98	0.556
clpP	Streptococcus pneumoniae Rx1	56.186	97.98	0.551
clpP	Streptococcus pneumoniae D39	56.186	97.98	0.551
clpP	Streptococcus pneumoniae R6	56.186	97.98	0.551
clpP	Streptococcus pneumoniae TIGR4	56.186	97.98	0.551
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.639	97.98	0.535