Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EUC40_RS12970 | Genome accession | NZ_CP040336 |
| Coordinates | 2536301..2536882 (+) | Length | 193 a.a. |
| NCBI ID | WP_156575566.1 | Uniprot ID | - |
| Organism | Bacillus luti strain FJ | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2531301..2541882
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EUC40_RS12935 | - | 2531333..2532013 (+) | 681 | WP_156575562.1 | SUMF1/EgtB/PvdO family nonheme iron enzyme | - |
| EUC40_RS12940 | - | 2532097..2533293 (+) | 1197 | WP_156575563.1 | macrolide family glycosyltransferase | - |
| EUC40_RS12945 | - | 2533347..2533859 (+) | 513 | WP_156575564.1 | hypothetical protein | - |
| EUC40_RS12950 | - | 2533915..2534349 (-) | 435 | WP_156575565.1 | GNAT family N-acetyltransferase | - |
| EUC40_RS12955 | rpiA | 2534461..2535126 (-) | 666 | WP_156576941.1 | ribose 5-phosphate isomerase A | - |
| EUC40_RS12960 | - | 2535131..2535451 (-) | 321 | WP_071711996.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| EUC40_RS12965 | - | 2535594..2536280 (+) | 687 | WP_071711997.1 | RNA polymerase subunit sigma-70 | - |
| EUC40_RS12970 | clpP | 2536301..2536882 (+) | 582 | WP_156575566.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| EUC40_RS12975 | - | 2536927..2537784 (-) | 858 | WP_156575567.1 | glycine betaine ABC transporter substrate-binding protein | - |
| EUC40_RS12980 | - | 2537956..2539161 (+) | 1206 | WP_071712000.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| EUC40_RS12985 | - | 2539154..2539990 (+) | 837 | WP_156575568.1 | proline/glycine betaine ABC transporter permease | - |
| EUC40_RS12990 | - | 2540040..2540276 (-) | 237 | WP_149175151.1 | hypothetical protein | - |
| EUC40_RS12995 | - | 2540492..2540658 (+) | 167 | Protein_2594 | septum formation initiator | - |
| EUC40_RS13000 | - | 2540771..2541250 (+) | 480 | WP_156575570.1 | HIT family protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21286.58 Da Isoelectric Point: 5.0972
>NTDB_id=363351 EUC40_RS12970 WP_156575566.1 2536301..2536882(+) (clpP) [Bacillus luti strain FJ]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGVKGQATEIEITAKRILKLKHDINKMIAEKTGQ
SLERVAHDTERDYFMTAEEAKEYGIVDDVVAKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGVKGQATEIEITAKRILKLKHDINKMIAEKTGQ
SLERVAHDTERDYFMTAEEAKEYGIVDDVVAKK
Nucleotide
Download Length: 582 bp
>NTDB_id=363351 EUC40_RS12970 WP_156575566.1 2536301..2536882(+) (clpP) [Bacillus luti strain FJ]
ATGAATACAATTCCATACGTCGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAGGA
CCGCATTATAATGATTGGTTCAGAAATTAACGATCAAGTAGCGAGTAGTGTAGTGGCTCAATTATTATTTTTAGAGGCAG
AAGATGCGGAAAAAGACATATTCCTGTATATTAATAGTCCTGGCGGTTCAACGACAGCTGGTTTTGCGATATTAGATACG
ATGAATCTAATTAAACCGGATGTGCAAACACTTTGTATGGGATTTGCGGCGTCATTTGGTGCATTGCTATTATTATCAGG
TGCAAAAGGAAAACGGTTTGCGTTACCTAATAGTGAAATTATGATTCATCAGCCGCTCGGTGGTGTAAAAGGGCAGGCAA
CGGAAATTGAAATAACTGCAAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
TCACTTGAACGAGTAGCTCATGATACAGAAAGAGATTATTTTATGACCGCTGAAGAAGCAAAGGAATATGGGATTGTAGA
TGATGTTGTTGCGAAAAAATAA
ATGAATACAATTCCATACGTCGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAGGA
CCGCATTATAATGATTGGTTCAGAAATTAACGATCAAGTAGCGAGTAGTGTAGTGGCTCAATTATTATTTTTAGAGGCAG
AAGATGCGGAAAAAGACATATTCCTGTATATTAATAGTCCTGGCGGTTCAACGACAGCTGGTTTTGCGATATTAGATACG
ATGAATCTAATTAAACCGGATGTGCAAACACTTTGTATGGGATTTGCGGCGTCATTTGGTGCATTGCTATTATTATCAGG
TGCAAAAGGAAAACGGTTTGCGTTACCTAATAGTGAAATTATGATTCATCAGCCGCTCGGTGGTGTAAAAGGGCAGGCAA
CGGAAATTGAAATAACTGCAAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
TCACTTGAACGAGTAGCTCATGATACAGAAAGAGATTATTTTATGACCGCTGAAGAAGCAAAGGAATATGGGATTGTAGA
TGATGTTGTTGCGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
68.421 |
98.446 |
0.674 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.725 |
97.927 |
0.663 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus thermophilus LMD-9 |
54.688 |
99.482 |
0.544 |
| clpP | Streptococcus thermophilus LMG 18311 |
54.688 |
99.482 |
0.544 |
| clpP | Streptococcus pyogenes JRS4 |
55.556 |
97.927 |
0.544 |
| clpP | Streptococcus pyogenes MGAS315 |
55.556 |
97.927 |
0.544 |
| clpP | Streptococcus mutans UA159 |
53.968 |
97.927 |
0.528 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
53.439 |
97.927 |
0.523 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
52.381 |
97.927 |
0.513 |