Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | FAY30_RS20290 | Genome accession | NZ_CP039727 |
| Coordinates | 4152915..4153520 (+) | Length | 201 a.a. |
| NCBI ID | WP_149871567.1 | Uniprot ID | - |
| Organism | Bacillus sp. S3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4147915..4158520
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAY30_RS20265 (FAY30_20265) | gap | 4148396..4149403 (-) | 1008 | WP_149871563.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| FAY30_RS20270 (FAY30_20270) | - | 4149453..4150475 (-) | 1023 | WP_149871564.1 | sugar-binding transcriptional regulator | - |
| FAY30_RS20275 (FAY30_20275) | - | 4150609..4150866 (-) | 258 | WP_149871565.1 | glutaredoxin family protein | - |
| FAY30_RS20280 (FAY30_20280) | rpoN | 4150882..4152204 (-) | 1323 | WP_149871566.1 | RNA polymerase factor sigma-54 | - |
| FAY30_RS20290 (FAY30_20290) | clpP | 4152915..4153520 (+) | 606 | WP_149871567.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| FAY30_RS20295 (FAY30_20295) | - | 4153635..4153892 (-) | 258 | WP_149871568.1 | HPr family phosphocarrier protein | - |
| FAY30_RS20300 (FAY30_20300) | whiA | 4153947..4154906 (-) | 960 | WP_149871569.1 | DNA-binding protein WhiA | - |
| FAY30_RS20305 (FAY30_20305) | - | 4154977..4155963 (-) | 987 | WP_149871570.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK | - |
| FAY30_RS20310 (FAY30_20310) | rapZ | 4155960..4156853 (-) | 894 | WP_149871571.1 | RNase adapter RapZ | - |
| FAY30_RS20315 (FAY30_20315) | - | 4156875..4157333 (-) | 459 | WP_149871572.1 | NUDIX hydrolase | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 22147.49 Da Isoelectric Point: 5.0937
>NTDB_id=360476 FAY30_RS20290 WP_149871567.1 4152915..4153520(+) (clpP) [Bacillus sp. S3]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAENPEKDITLYINSPGGSITAGMAIYDT
MQYIKADVSTVCIGMAASMGAFLLAAGTKGKRYALPNAEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNGILAERTGQ
PLEVIQRDTDRDNFMTAERAKEYGLIDNIVTRNPNEIKDKK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAENPEKDITLYINSPGGSITAGMAIYDT
MQYIKADVSTVCIGMAASMGAFLLAAGTKGKRYALPNAEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNGILAERTGQ
PLEVIQRDTDRDNFMTAERAKEYGLIDNIVTRNPNEIKDKK
Nucleotide
Download Length: 606 bp
>NTDB_id=360476 FAY30_RS20290 WP_149871567.1 4152915..4153520(+) (clpP) [Bacillus sp. S3]
ATGAATTTGATTCCTACAGTTATTGAACAAACAAACCGCGGAGAACGTGCATATGACATTTATTCCCGTCTGTTAAAAGA
TCGGATTATTATGCTTGGCAGCGCGATTGATGACAATGTTGCCAACAGCATTGTAGCACAATTACTATTTTTAGAAGCGG
AAAATCCTGAAAAAGATATTACCCTTTACATCAATAGCCCAGGTGGAAGCATTACAGCCGGTATGGCTATTTATGATACC
ATGCAGTATATTAAAGCAGATGTTTCAACTGTTTGTATCGGGATGGCTGCATCGATGGGTGCATTCTTACTTGCTGCGGG
CACAAAAGGCAAGCGCTATGCATTGCCTAATGCCGAAGTTATGATCCATCAGCCACTTGGCGGTGCTCAAGGACAAGCGA
CAGAAATCGAGATCGCCGCGAAACGCATTCTTTTCCTTCGCGAAAAATTAAATGGTATCCTTGCAGAGCGCACAGGCCAG
CCACTTGAAGTGATTCAACGCGATACTGATCGTGATAACTTCATGACAGCTGAAAGAGCAAAGGAATACGGCTTAATTGA
CAACATCGTTACCCGTAACCCTAATGAAATCAAAGATAAAAAGTAA
ATGAATTTGATTCCTACAGTTATTGAACAAACAAACCGCGGAGAACGTGCATATGACATTTATTCCCGTCTGTTAAAAGA
TCGGATTATTATGCTTGGCAGCGCGATTGATGACAATGTTGCCAACAGCATTGTAGCACAATTACTATTTTTAGAAGCGG
AAAATCCTGAAAAAGATATTACCCTTTACATCAATAGCCCAGGTGGAAGCATTACAGCCGGTATGGCTATTTATGATACC
ATGCAGTATATTAAAGCAGATGTTTCAACTGTTTGTATCGGGATGGCTGCATCGATGGGTGCATTCTTACTTGCTGCGGG
CACAAAAGGCAAGCGCTATGCATTGCCTAATGCCGAAGTTATGATCCATCAGCCACTTGGCGGTGCTCAAGGACAAGCGA
CAGAAATCGAGATCGCCGCGAAACGCATTCTTTTCCTTCGCGAAAAATTAAATGGTATCCTTGCAGAGCGCACAGGCCAG
CCACTTGAAGTGATTCAACGCGATACTGATCGTGATAACTTCATGACAGCTGAAAGAGCAAAGGAATACGGCTTAATTGA
CAACATCGTTACCCGTAACCCTAATGAAATCAAAGATAAAAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
85.572 |
100 |
0.856 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.539 |
95.025 |
0.642 |
| clpP | Streptococcus thermophilus LMG 18311 |
59.585 |
96.02 |
0.572 |
| clpP | Streptococcus thermophilus LMD-9 |
59.585 |
96.02 |
0.572 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.549 |
96.02 |
0.562 |
| clpP | Streptococcus pneumoniae D39 |
58.031 |
96.02 |
0.557 |
| clpP | Streptococcus pneumoniae Rx1 |
58.031 |
96.02 |
0.557 |
| clpP | Streptococcus pneumoniae R6 |
58.031 |
96.02 |
0.557 |
| clpP | Streptococcus pneumoniae TIGR4 |
58.031 |
96.02 |
0.557 |
| clpP | Streptococcus pyogenes JRS4 |
56.995 |
96.02 |
0.547 |
| clpP | Streptococcus pyogenes MGAS315 |
56.995 |
96.02 |
0.547 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.477 |
96.02 |
0.542 |
| clpP | Streptococcus mutans UA159 |
55.155 |
96.517 |
0.532 |