Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | FAY30_RS11355 | Genome accession | NZ_CP039727 |
| Coordinates | 2358832..2359416 (+) | Length | 194 a.a. |
| NCBI ID | WP_149869991.1 | Uniprot ID | - |
| Organism | Bacillus sp. S3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2353832..2364416
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAY30_RS11320 (FAY30_11320) | - | 2354159..2354437 (-) | 279 | WP_149869984.1 | hypothetical protein | - |
| FAY30_RS11325 (FAY30_11325) | - | 2354648..2356018 (+) | 1371 | WP_149869985.1 | MATE family efflux transporter | - |
| FAY30_RS11330 (FAY30_11330) | - | 2356149..2356517 (+) | 369 | WP_149869986.1 | hypothetical protein | - |
| FAY30_RS11335 (FAY30_11335) | - | 2356622..2356819 (-) | 198 | WP_149869987.1 | hypothetical protein | - |
| FAY30_RS11340 (FAY30_11340) | - | 2357068..2357679 (+) | 612 | WP_149869988.1 | TetR/AcrR family transcriptional regulator | - |
| FAY30_RS11345 (FAY30_11345) | - | 2357870..2358010 (+) | 141 | WP_149869989.1 | YrzI family small protein | - |
| FAY30_RS11350 (FAY30_11350) | - | 2358107..2358802 (+) | 696 | WP_149869990.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| FAY30_RS11355 (FAY30_11355) | clpP | 2358832..2359416 (+) | 585 | WP_149869991.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| FAY30_RS11360 (FAY30_11360) | - | 2359440..2360546 (-) | 1107 | WP_223820945.1 | AbrB family transcriptional regulator | - |
| FAY30_RS11365 (FAY30_11365) | - | 2360719..2360997 (-) | 279 | WP_149869992.1 | hypothetical protein | - |
| FAY30_RS11370 (FAY30_11370) | - | 2361213..2361392 (+) | 180 | WP_223820946.1 | Fur-regulated basic protein FbpA | - |
| FAY30_RS11375 (FAY30_11375) | - | 2361862..2361990 (+) | 129 | WP_411675493.1 | YezD family protein | - |
| FAY30_RS11380 (FAY30_11380) | - | 2362156..2362872 (+) | 717 | WP_149869993.1 | phosphoadenylyl-sulfate reductase | - |
| FAY30_RS11385 (FAY30_11385) | - | 2362939..2363997 (+) | 1059 | WP_149869994.1 | inorganic phosphate transporter | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21461.54 Da Isoelectric Point: 5.6817
>NTDB_id=360460 FAY30_RS11355 WP_149869991.1 2358832..2359416(+) (clpP) [Bacillus sp. S3]
MSTIPYVIEQSNRGERSYDIYSRLLKDRIIIIGDEINDHTANSVVAQLLFLAADAPDKEISLYINSPGGSTSAGFAIYDT
MQYIKPDIRTICTGMAASFGAMLLLAGTKGKRYALPNSEIMIHQPLGGARGQATEIEISARRILKLKEHINQIISERTGQ
PVEKVANDTERDFFMSAEEAKSYGIIDEILHPKI
MSTIPYVIEQSNRGERSYDIYSRLLKDRIIIIGDEINDHTANSVVAQLLFLAADAPDKEISLYINSPGGSTSAGFAIYDT
MQYIKPDIRTICTGMAASFGAMLLLAGTKGKRYALPNSEIMIHQPLGGARGQATEIEISARRILKLKEHINQIISERTGQ
PVEKVANDTERDFFMSAEEAKSYGIIDEILHPKI
Nucleotide
Download Length: 585 bp
>NTDB_id=360460 FAY30_RS11355 WP_149869991.1 2358832..2359416(+) (clpP) [Bacillus sp. S3]
ATGAGTACCATTCCATATGTGATTGAACAATCTAACCGCGGGGAACGTTCCTATGATATATACTCTCGGCTCCTAAAGGA
CCGAATTATAATCATTGGTGATGAAATAAATGACCATACGGCGAATAGTGTGGTCGCTCAATTATTATTTTTAGCAGCAG
ATGCACCGGATAAAGAAATCTCACTCTATATAAATAGCCCCGGCGGCTCCACTTCAGCGGGCTTCGCCATTTACGATACG
ATGCAATACATTAAGCCCGATATCCGGACGATCTGCACCGGCATGGCGGCATCTTTCGGAGCGATGTTACTGCTTGCGGG
GACAAAGGGAAAACGGTATGCCCTGCCAAATAGCGAAATTATGATTCATCAGCCATTGGGCGGTGCAAGAGGGCAGGCAA
CGGAGATTGAAATTTCCGCACGGCGGATTTTAAAGTTAAAAGAACACATTAATCAAATCATTTCCGAACGGACCGGACAG
CCGGTGGAAAAGGTAGCAAATGATACCGAGCGGGACTTCTTTATGAGTGCGGAGGAAGCAAAATCATACGGAATCATCGA
TGAAATACTTCATCCCAAAATCTAA
ATGAGTACCATTCCATATGTGATTGAACAATCTAACCGCGGGGAACGTTCCTATGATATATACTCTCGGCTCCTAAAGGA
CCGAATTATAATCATTGGTGATGAAATAAATGACCATACGGCGAATAGTGTGGTCGCTCAATTATTATTTTTAGCAGCAG
ATGCACCGGATAAAGAAATCTCACTCTATATAAATAGCCCCGGCGGCTCCACTTCAGCGGGCTTCGCCATTTACGATACG
ATGCAATACATTAAGCCCGATATCCGGACGATCTGCACCGGCATGGCGGCATCTTTCGGAGCGATGTTACTGCTTGCGGG
GACAAAGGGAAAACGGTATGCCCTGCCAAATAGCGAAATTATGATTCATCAGCCATTGGGCGGTGCAAGAGGGCAGGCAA
CGGAGATTGAAATTTCCGCACGGCGGATTTTAAAGTTAAAAGAACACATTAATCAAATCATTTCCGAACGGACCGGACAG
CCGGTGGAAAAGGTAGCAAATGATACCGAGCGGGACTTCTTTATGAGTGCGGAGGAAGCAAAATCATACGGAATCATCGA
TGAAATACTTCATCCCAAAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
71.579 |
97.938 |
0.701 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.617 |
96.907 |
0.665 |
| clpP | Streptococcus thermophilus LMG 18311 |
57.143 |
97.423 |
0.557 |
| clpP | Streptococcus thermophilus LMD-9 |
57.143 |
97.423 |
0.557 |
| clpP | Streptococcus pneumoniae D39 |
56.085 |
97.423 |
0.546 |
| clpP | Streptococcus pneumoniae Rx1 |
56.085 |
97.423 |
0.546 |
| clpP | Streptococcus pneumoniae R6 |
56.085 |
97.423 |
0.546 |
| clpP | Streptococcus pneumoniae TIGR4 |
56.085 |
97.423 |
0.546 |
| clpP | Streptococcus pyogenes JRS4 |
54.497 |
97.423 |
0.531 |
| clpP | Streptococcus pyogenes MGAS315 |
54.497 |
97.423 |
0.531 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
53.684 |
97.938 |
0.526 |
| clpP | Streptococcus mutans UA159 |
52.083 |
98.969 |
0.515 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
52.381 |
97.423 |
0.51 |