Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   I33_RS00215 Genome accession   NC_017195
Coordinates   41514..42341 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis subsp. subtilis str. RO-NN-1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36514..47341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I33_RS00190 (I33_0038) efpO 37577..39019 (+) 1443 WP_014475563.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  I33_RS00195 (I33_0039) tmk 39016..39654 (+) 639 WP_014475564.1 dTMP kinase -
  I33_RS00200 (I33_0040) darA 39728..40057 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  I33_RS00205 (I33_0041) yaaR 40070..40510 (+) 441 WP_009966249.1 YaaR family protein -
  I33_RS00210 (I33_0042) holB 40522..41511 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  I33_RS00215 (I33_0043) yaaT 41514..42341 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  I33_RS00220 (I33_0044) yabA 42356..42715 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  I33_RS00225 (I33_0045) trmNF 42774..43517 (+) 744 WP_014475566.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  I33_RS00230 (I33_0046) yazA 43504..43803 (+) 300 WP_014475567.1 GIY-YIG nuclease family protein -
  I33_RS00235 (I33_0047) rsmI 43778..44656 (+) 879 WP_014475568.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  I33_RS00240 (I33_0048) abrB 44705..44995 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=35913 I33_RS00215 WP_003226767.1 41514..42341(+) (yaaT) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=35913 I33_RS00215 WP_003226767.1 41514..42341(+) (yaaT) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTGATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996

Multiple sequence alignment