Detailed information NTG0358831

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: E8M06_RS00790
• Genome accession: NZ_CP039462
• Coordinates: 126668..127102 (+)
• Length: 144 a.a.
• NCBI ID: WP_044687018.1
• Uniprot ID: -
• Organism: Streptococcus suis strain WUSS351
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 121668..132102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E8M06_RS00755 (E8M06_00755)	-	122410..122775 (+)	366	WP_024395451.1	DUF1033 family protein	-
E8M06_RS00760 (E8M06_00760)	-	122810..123760 (-)	951	WP_136581014.1	S66 peptidase family protein	-
E8M06_RS00765 (E8M06_00765)	comYA	123846..124796 (+)	951	WP_136581015.1	competence type IV pilus ATPase ComGA	Machinery gene
E8M06_RS00770 (E8M06_00770)	comYB	124708..125745 (+)	1038	WP_247904444.1	competence type IV pilus assembly protein ComGB	Machinery gene
E8M06_RS00775 (E8M06_00775)	comYC	125747..126028 (+)	282	WP_105145695.1	competence type IV pilus major pilin ComGC	Machinery gene
E8M06_RS00780 (E8M06_00780)	comGD	126009..126416 (+)	408	WP_136581016.1	competence type IV pilus minor pilin ComGD	-
E8M06_RS00785 (E8M06_00785)	comYE	126388..126681 (+)	294	WP_044680789.1	competence type IV pilus minor pilin ComGE	Machinery gene
E8M06_RS00790 (E8M06_00790)	comGF/cglF	126668..127102 (+)	435	WP_044687018.1	competence type IV pilus minor pilin ComGF	Machinery gene
E8M06_RS00795 (E8M06_00795)	comGG	127080..127490 (+)	411	WP_024395444.1	competence type IV pilus minor pilin ComGG	-
E8M06_RS00800 (E8M06_00800)	comYH	127547..128500 (+)	954	WP_044778430.1	class I SAM-dependent methyltransferase	Machinery gene
E8M06_RS00805 (E8M06_00805)	-	128550..129737 (+)	1188	WP_014637319.1	acetate kinase	-
E8M06_RS00810 (E8M06_00810)	-	130052..130603 (+)	552	WP_136581017.1	folate family ECF transporter S component	-
E8M06_RS00815 (E8M06_00815)	-	130659..131915 (+)	1257	WP_044778431.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16419.74 Da
• Isoelectric Point: 6.9832

>NTDB_id=358831 E8M06_RS00790 WP_044687018.1 126668..127102(+) (comGF/cglF) [Streptococcus suis strain WUSS351]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=358831 E8M06_RS00790 WP_044687018.1 126668..127102(+) (comGF/cglF) [Streptococcus suis strain WUSS351]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCACATTATCAAGGTCAGACCGTTCAAAAGGAATGGCTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGCGAA
CAGGCTTTGGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGTTACCAGCCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae D39	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae R6	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae TIGR4	53.191	97.917	0.521
comYF	Streptococcus mutans UA140	50	100	0.5
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458