Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | E8M05_RS03255 | Genome accession | NZ_CP039457 |
| Coordinates | 585612..586277 (+) | Length | 221 a.a. |
| NCBI ID | WP_048791496.1 | Uniprot ID | A0AAW6YB25 |
| Organism | Streptococcus pasteurianus strain WUSP067 | ||
| Function | dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 580612..591277
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E8M05_RS03225 (E8M05_03220) | - | 580687..581865 (+) | 1179 | WP_048791494.1 | MFS transporter | - |
| E8M05_RS03230 (E8M05_03225) | - | 581920..582780 (+) | 861 | WP_048791495.1 | helix-turn-helix transcriptional regulator | - |
| E8M05_RS03235 (E8M05_03230) | - | 582785..583414 (+) | 630 | WP_048791504.1 | ROK family protein | - |
| E8M05_RS03240 (E8M05_03235) | - | 583646..583927 (-) | 282 | WP_003063819.1 | GIY-YIG nuclease family protein | - |
| E8M05_RS03245 (E8M05_03240) | - | 583902..584663 (-) | 762 | WP_003063822.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| E8M05_RS03250 (E8M05_03245) | - | 584771..585517 (+) | 747 | WP_003063827.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| E8M05_RS03255 (E8M05_03250) | comEA | 585612..586277 (+) | 666 | WP_048791496.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| E8M05_RS03260 (E8M05_03255) | comEC/celB | 586270..588501 (+) | 2232 | WP_048791497.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| E8M05_RS03265 (E8M05_03260) | holA | 588575..589612 (+) | 1038 | WP_003063837.1 | DNA polymerase III subunit delta | - |
| E8M05_RS03270 (E8M05_03265) | sodA | 589701..590309 (+) | 609 | WP_013851603.1 | superoxide dismutase SodA | - |
| E8M05_RS03275 (E8M05_03270) | - | 590458..591183 (+) | 726 | WP_003063840.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 23615.37 Da Isoelectric Point: 4.2822
>NTDB_id=358785 E8M05_RS03255 WP_048791496.1 585612..586277(+) (comEA) [Streptococcus pasteurianus strain WUSP067]
MIEEIKEKLLENKTLAAVLGIILVMIIGFFAWLNVTKTTADAQNDLPALSTTFSTSSSASDLKTERSSSQTETQKMFVDI
KGAVKNEGVYELSNGSRVTDVVKLAGGFTEDADKKSVNLAEKVTDESVIYVARVDENVAPATTNSQANGSAQQEESSDKI
NLNTATLAELQTISGIGAKRAQDIIDYRDANGGFSSVDDLANVSGIGEKILEKLKSEVTVD
MIEEIKEKLLENKTLAAVLGIILVMIIGFFAWLNVTKTTADAQNDLPALSTTFSTSSSASDLKTERSSSQTETQKMFVDI
KGAVKNEGVYELSNGSRVTDVVKLAGGFTEDADKKSVNLAEKVTDESVIYVARVDENVAPATTNSQANGSAQQEESSDKI
NLNTATLAELQTISGIGAKRAQDIIDYRDANGGFSSVDDLANVSGIGEKILEKLKSEVTVD
Nucleotide
Download Length: 666 bp
>NTDB_id=358785 E8M05_RS03255 WP_048791496.1 585612..586277(+) (comEA) [Streptococcus pasteurianus strain WUSP067]
ATGATTGAAGAAATAAAAGAAAAACTTTTGGAGAACAAAACGTTGGCAGCGGTATTGGGGATAATACTTGTCATGATAAT
CGGATTTTTTGCTTGGTTAAATGTGACAAAAACAACAGCGGATGCGCAAAATGACCTACCTGCCCTAAGCACGACTTTTT
CGACAAGTAGTAGCGCAAGTGATTTAAAAACAGAACGTTCAAGTTCGCAAACTGAGACTCAAAAAATGTTTGTAGATATC
AAAGGTGCTGTGAAAAATGAGGGGGTTTATGAGCTTTCAAACGGTAGCCGTGTGACAGATGTGGTCAAATTAGCAGGTGG
TTTTACAGAAGATGCTGATAAGAAGTCGGTGAATCTGGCTGAAAAAGTAACCGATGAATCGGTGATTTATGTGGCAAGAG
TTGATGAAAATGTTGCTCCTGCAACGACTAATTCACAAGCAAATGGCAGCGCTCAACAGGAAGAAAGTTCAGATAAAATC
AACCTTAATACCGCAACTTTGGCGGAACTCCAGACGATTTCTGGCATTGGCGCCAAACGTGCCCAAGATATTATTGACTA
CCGTGATGCTAATGGTGGTTTTTCATCAGTTGATGACTTAGCGAATGTGTCTGGTATCGGAGAAAAAATACTAGAAAAGC
TAAAATCTGAGGTGACCGTTGATTAA
ATGATTGAAGAAATAAAAGAAAAACTTTTGGAGAACAAAACGTTGGCAGCGGTATTGGGGATAATACTTGTCATGATAAT
CGGATTTTTTGCTTGGTTAAATGTGACAAAAACAACAGCGGATGCGCAAAATGACCTACCTGCCCTAAGCACGACTTTTT
CGACAAGTAGTAGCGCAAGTGATTTAAAAACAGAACGTTCAAGTTCGCAAACTGAGACTCAAAAAATGTTTGTAGATATC
AAAGGTGCTGTGAAAAATGAGGGGGTTTATGAGCTTTCAAACGGTAGCCGTGTGACAGATGTGGTCAAATTAGCAGGTGG
TTTTACAGAAGATGCTGATAAGAAGTCGGTGAATCTGGCTGAAAAAGTAACCGATGAATCGGTGATTTATGTGGCAAGAG
TTGATGAAAATGTTGCTCCTGCAACGACTAATTCACAAGCAAATGGCAGCGCTCAACAGGAAGAAAGTTCAGATAAAATC
AACCTTAATACCGCAACTTTGGCGGAACTCCAGACGATTTCTGGCATTGGCGCCAAACGTGCCCAAGATATTATTGACTA
CCGTGATGCTAATGGTGGTTTTTCATCAGTTGATGACTTAGCGAATGTGTCTGGTATCGGAGAAAAAATACTAGAAAAGC
TAAAATCTGAGGTGACCGTTGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Streptococcus thermophilus LMD-9 |
46.862 |
100 |
0.507 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
45.701 |
100 |
0.457 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
44.091 |
99.548 |
0.439 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
43.439 |
100 |
0.434 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
43.182 |
99.548 |
0.43 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
43.182 |
99.548 |
0.43 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
43.182 |
99.548 |
0.43 |
| comEA | Latilactobacillus sakei subsp. sakei 23K |
37.5 |
100 |
0.38 |