Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   E8M05_RS00790 Genome accession   NZ_CP039457
Coordinates   106655..106837 (+) Length   60 a.a.
NCBI ID   WP_020915980.1    Uniprot ID   A0AB33AJ17
Organism   Streptococcus pasteurianus strain WUSP067     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IS/Tn 105148..106289 106655..106837 flank 366


Gene organization within MGE regions


Location: 105148..106837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M05_RS00780 (E8M05_00775) - 105166..105771 (+) 606 Protein_103 IS1595-like element ISSag10 family transposase -
  E8M05_RS00785 (E8M05_00780) lnu(C) 105795..106289 (+) 495 WP_002837187.1 lincosamide nucleotidyltransferase Lnu(C) -
  E8M05_RS00790 (E8M05_00785) prx 106655..106837 (+) 183 WP_020915980.1 hypothetical protein Regulator

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7021.07 Da        Isoelectric Point: 4.2558

>NTDB_id=358762 E8M05_RS00790 WP_020915980.1 106655..106837(+) (prx) [Streptococcus pasteurianus strain WUSP067]
MLYYDELKEAIDRGFIKGDTVQIVRKNGMVFDYVLPNEPVKPYEIVTTERVADVLEELKE

Nucleotide


Download         Length: 183 bp        

>NTDB_id=358762 E8M05_RS00790 WP_020915980.1 106655..106837(+) (prx) [Streptococcus pasteurianus strain WUSP067]
ATGTTATATTATGATGAACTAAAAGAGGCAATCGATAGAGGTTTTATAAAGGGTGATACCGTTCAAATTGTGAGAAAGAA
TGGGATGGTATTTGATTATGTTCTCCCTAACGAACCAGTAAAGCCCTATGAGATAGTTACTACTGAACGAGTAGCAGACG
TTTTGGAAGAGCTAAAAGAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

67.797

98.333

0.667
  prx Streptococcus pyogenes MGAS315

65.517

96.667

0.633
  prx Streptococcus pyogenes MGAS8232

65.517

96.667

0.633
  prx Streptococcus pyogenes MGAS315

65.517

96.667

0.633
  prx Streptococcus pyogenes MGAS315

71.429

70

0.5
  prx Streptococcus pyogenes MGAS315

73.171

68.333

0.5
  prx Streptococcus pyogenes MGAS315

68.293

68.333

0.467

Multiple sequence alignment