Detailed information NTG0357680

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GR130_RS24895
• Genome accession: NZ_CP047146
• Coordinates: 5721668..5722303 (+)
• Length: 211 a.a.
• NCBI ID: WP_159506774.1
• Uniprot ID: -
• Organism: Streptomyces sp. GS7
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 5716668..5727303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GR130_RS24870 (GR130_24870)	-	5717414..5719135 (-)	1722	WP_159506769.1	urease subunit alpha	-
GR130_RS24875 (GR130_24875)	-	5719128..5719439 (-)	312	WP_159506770.1	urease subunit beta	-
GR130_RS24880 (GR130_24880)	-	5719457..5719759 (-)	303	WP_159506771.1	urease subunit gamma	-
GR130_RS24885 (GR130_24885)	-	5720289..5721236 (+)	948	WP_159506772.1	M28 family metallopeptidase	-
GR130_RS24890 (GR130_24890)	-	5721294..5721608 (-)	315	WP_159506773.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
GR130_RS24895 (GR130_24895)	clpP	5721668..5722303 (+)	636	WP_159506774.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GR130_RS24900 (GR130_24900)	-	5722310..5722618 (+)	309	WP_159506775.1	hypothetical protein	-
GR130_RS24905 (GR130_24905)	-	5722989..5723453 (+)	465	WP_159506776.1	C40 family peptidase	-
GR130_RS24910 (GR130_24910)	-	5723531..5724211 (-)	681	WP_159506777.1	LysE family transporter	-
GR130_RS24915 (GR130_24915)	-	5724283..5725212 (+)	930	WP_159506778.1	LysR family transcriptional regulator	-
GR130_RS24920 (GR130_24920)	-	5725253..5725681 (-)	429	WP_159506779.1	ATP-binding protein	-
GR130_RS24925 (GR130_24925)	-	5725973..5727187 (-)	1215	WP_159506780.1	8-amino-7-oxononanoate synthase	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 23264.41 Da
• Isoelectric Point: 5.3512

>NTDB_id=357680 GR130_RS24895 WP_159506774.1 5721668..5722303(+) (clpP) [Streptomyces sp. GS7]
MLRPAARHVLPEFTERTTDGTRTMDPYSKLLSERIVFLGTPIDDTCANDVMAQFIHLEHAAPDQDISLYINSPGGSFTAM
CAIYDTMRFVSCDVETVCLGQAASSAAVLLAAGAPGKRLALPRARVLIHQPSFAEPVQGQTTDLQIKAEELLRTRDRLEE
MLAEHTGQPRERIAADIERDTVFDAPAAREYGLIDGLTRDRKRSADRPAAR

Nucleotide

• Length: 636 bp

>NTDB_id=357680 GR130_RS24895 WP_159506774.1 5721668..5722303(+) (clpP) [Streptomyces sp. GS7]
ATGCTGCGACCCGCGGCGCGCCACGTCCTGCCGGAGTTCACCGAACGCACCACCGACGGGACCCGGACCATGGACCCGTA
CTCCAAGCTGCTCAGCGAACGGATCGTCTTCCTGGGCACCCCCATCGACGACACCTGCGCCAACGACGTCATGGCGCAGT
TCATCCACCTCGAACACGCCGCGCCCGACCAGGACATCTCGCTCTACATCAACTCCCCCGGCGGCTCGTTCACCGCGATG
TGCGCCATCTACGACACGATGCGCTTCGTCTCCTGCGACGTGGAGACCGTCTGCCTGGGGCAGGCCGCCTCCTCGGCCGC
GGTGTTGCTGGCCGCCGGCGCCCCGGGGAAGCGGCTGGCCCTCCCCCGGGCCCGGGTCCTGATCCACCAGCCGTCGTTCG
CCGAGCCGGTCCAGGGGCAGACCACCGATCTCCAGATCAAGGCGGAGGAACTGCTGCGCACCCGCGACAGGCTGGAGGAG
ATGCTGGCCGAGCACACCGGGCAGCCCCGCGAGCGGATCGCCGCGGACATCGAGCGCGACACGGTCTTCGACGCCCCGGC
CGCCCGGGAGTACGGCCTGATCGACGGGCTCACCCGCGACCGCAAGCGGTCCGCCGACCGGCCCGCGGCGCGGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50	93.839	0.469
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.849	88.152	0.422
clpP	Streptococcus pneumoniae Rx1	45.989	88.626	0.408
clpP	Streptococcus pneumoniae D39	45.989	88.626	0.408
clpP	Streptococcus pneumoniae R6	45.989	88.626	0.408
clpP	Streptococcus pneumoniae TIGR4	45.989	88.626	0.408
clpP	Streptococcus thermophilus LMG 18311	42.784	91.943	0.393
clpP	Streptococcus thermophilus LMD-9	42.784	91.943	0.393
clpP	Lactococcus lactis subsp. cremoris KW2	43.617	89.1	0.389
clpP	Streptococcus mutans UA159	42.268	91.943	0.389
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	42.268	91.943	0.389
clpP	Streptococcus pyogenes JRS4	42.268	91.943	0.389
clpP	Streptococcus pyogenes MGAS315	42.268	91.943	0.389