Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   GQ677_RS06050 Genome accession   NZ_CP047120
Coordinates   1189274..1189456 (-) Length   60 a.a.
NCBI ID   WP_029714017.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1085     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1184274..1194456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQ677_RS06040 (GQ677_06040) lepA 1186160..1187992 (-) 1833 WP_010922253.1 translation elongation factor 4 -
  GQ677_RS06045 (GQ677_06045) - 1188116..1188523 (-) 408 Protein_1126 nucleoside-diphosphate kinase -
  GQ677_RS06050 (GQ677_06050) prx 1189274..1189456 (-) 183 WP_029714017.1 hypothetical protein Regulator
  GQ677_RS06055 (GQ677_06055) - 1189655..1189864 (-) 210 WP_011054450.1 helix-turn-helix domain-containing protein -
  GQ677_RS10395 - 1190018..1190164 (+) 147 WP_011054449.1 hypothetical protein -
  GQ677_RS06060 (GQ677_06060) - 1190305..1190556 (+) 252 WP_011054448.1 hypothetical protein -
  GQ677_RS06065 (GQ677_06065) - 1190820..1191059 (+) 240 WP_011054447.1 hypothetical protein -
  GQ677_RS06070 (GQ677_06070) - 1191117..1191473 (+) 357 WP_011054446.1 hypothetical protein -
  GQ677_RS06075 (GQ677_06075) - 1191589..1192797 (-) 1209 WP_032465153.1 glucosaminidase domain-containing protein -
  GQ677_RS06080 (GQ677_06080) - 1192908..1193093 (-) 186 WP_002990010.1 holin -
  GQ677_RS06085 (GQ677_06085) - 1193090..1193386 (-) 297 WP_002990012.1 hypothetical protein -
  GQ677_RS06090 (GQ677_06090) - 1193397..1194029 (-) 633 WP_032465154.1 hypothetical protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6890.90 Da        Isoelectric Point: 4.1947

>NTDB_id=357325 GQ677_RS06050 WP_029714017.1 1189274..1189456(-) (prx) [Streptococcus pyogenes strain 1085]
MLTYDEFKQAIDNGYITADTVAIVRKNGLIFDYVLPHESVRSCEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=357325 GQ677_RS06050 WP_029714017.1 1189274..1189456(-) (prx) [Streptococcus pyogenes strain 1085]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTAGCGATCGTGCGTAAAAA
CGGATTGATATTTGATTATGTGTTGCCGCACGAGTCTGTGAGATCGTGTGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

80.952

70

0.567

  prx Streptococcus pyogenes MGAS315

78.571

70

0.55


Multiple sequence alignment