Detailed information NTG0356921

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: A7X85_RS09350
• Genome accession: NZ_CP047019
• Coordinates: 2179419..2180048 (+)
• Length: 209 a.a.
• NCBI ID: WP_109362317.1
• Uniprot ID: -
• Organism: Streptomyces sp. ST1015
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2174419..2185048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7X85_RS09320 (A7X85_09370)	-	2174749..2176470 (-)	1722	WP_109362313.1	urease subunit alpha	-
A7X85_RS09325 (A7X85_09375)	-	2176463..2176774 (-)	312	WP_112472043.1	urease subunit beta	-
A7X85_RS09330 (A7X85_09380)	-	2176783..2177085 (-)	303	WP_010355509.1	urease subunit gamma	-
A7X85_RS09335 (A7X85_09385)	-	2177194..2177844 (-)	651	WP_112472044.1	TetR/AcrR family transcriptional regulator	-
A7X85_RS09340 (A7X85_09390)	-	2177947..2178990 (+)	1044	WP_262414464.1	ABC transporter permease	-
A7X85_RS09345 (A7X85_09395)	-	2179079..2179357 (-)	279	WP_109362316.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
A7X85_RS09350 (A7X85_09400)	clpP	2179419..2180048 (+)	630	WP_109362317.1	ATP-dependent Clp protease proteolytic subunit	Regulator
A7X85_RS09355 (A7X85_09405)	-	2180056..2180358 (+)	303	WP_055720089.1	hypothetical protein	-
A7X85_RS09360 (A7X85_09410)	-	2181027..2181500 (+)	474	WP_055720088.1	C40 family peptidase	-
A7X85_RS09365 (A7X85_09415)	-	2181493..2181930 (-)	438	WP_055720087.1	ATP-binding protein	-
A7X85_RS09370 (A7X85_09420)	-	2182157..2183017 (+)	861	WP_055720093.1	helix-turn-helix domain-containing protein	-
A7X85_RS09375 (A7X85_09425)	-	2183030..2183248 (+)	219	WP_112476927.1	DUF397 domain-containing protein	-
A7X85_RS09380 (A7X85_09430)	-	2183278..2184404 (-)	1127	Protein_1912	8-amino-7-oxononanoate synthase	-

Sequence

Protein

• Length: 209 a.a.
• Molecular weight: 22761.72 Da
• Isoelectric Point: 4.8000

>NTDB_id=356921 A7X85_RS09350 WP_109362317.1 2179419..2180048(+) (clpP) [Streptomyces sp. ST1015]
MNRPTAHAHARHVLPEFHERTSNGTRTLDPYSKLLEERIVFLGTPVDDISANDVMAQFMHLEYKDPDQAISLYINSPGGS
FTAMAAIYDTMRYVSCEVETICLGQAGASAAILLAAGTPGKRLMLPGARVVISQPEAGEIQGQASDLAIQAEELSRTRAL
LEDMLVRHTGRTPQQVTEDIERDLVLDADAAVAYGLVDRIVSNREASGR

Nucleotide

• Length: 630 bp

>NTDB_id=356921 A7X85_RS09350 WP_109362317.1 2179419..2180048(+) (clpP) [Streptomyces sp. ST1015]
ATGAACCGCCCGACCGCCCATGCCCACGCGCGCCACGTCCTGCCGGAGTTCCACGAACGCACGAGCAACGGCACCCGGAC
GCTGGACCCGTACTCGAAGCTCCTGGAGGAGCGGATCGTCTTCCTGGGGACGCCGGTGGACGACATCTCGGCGAACGACG
TGATGGCCCAGTTCATGCACCTGGAGTACAAGGACCCGGACCAGGCGATCTCGCTGTACATCAACTCCCCGGGCGGCTCG
TTCACGGCGATGGCGGCGATCTACGACACGATGCGGTACGTCAGCTGCGAGGTGGAGACGATCTGCCTGGGCCAGGCGGG
CGCGTCGGCGGCGATCCTGCTCGCGGCCGGCACCCCGGGCAAGCGGCTGATGCTGCCCGGCGCGCGGGTGGTGATCAGCC
AGCCCGAGGCCGGCGAGATCCAGGGCCAGGCCAGCGATCTCGCCATCCAGGCCGAGGAGTTGAGCCGTACCCGCGCGCTC
CTGGAGGACATGCTCGTACGCCACACGGGCCGCACCCCGCAGCAGGTGACCGAGGACATCGAACGGGACCTTGTGCTCGA
CGCGGACGCGGCGGTCGCGTACGGCCTCGTCGACCGGATCGTGTCCAACCGCGAGGCGAGCGGAAGGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (23-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	43.814	92.823	0.407
clpP	Streptococcus mutans UA159	43.299	92.823	0.402
clpP	Streptococcus pyogenes JRS4	42.268	92.823	0.392
clpP	Streptococcus pyogenes MGAS315	42.268	92.823	0.392
clpP	Lactococcus lactis subsp. cremoris KW2	42.487	92.344	0.392
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	43.085	89.952	0.388
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	40.933	92.344	0.378
clpP	Streptococcus pneumoniae Rx1	40.415	92.344	0.373
clpP	Streptococcus pneumoniae D39	40.415	92.344	0.373
clpP	Streptococcus pneumoniae R6	40.415	92.344	0.373
clpP	Streptococcus pneumoniae TIGR4	40.415	92.344	0.373
clpP	Streptococcus thermophilus LMG 18311	40.206	92.823	0.373
clpP	Streptococcus thermophilus LMD-9	40.206	92.823	0.373