Detailed information NTG0353915

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: GO602_RS28230
• Genome accession: NZ_CP046602
• Coordinates: 6063412..6064905 (+)
• Length: 497 a.a.
• NCBI ID: WP_024916789.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain CMC-115
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6058412..6069905

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO602_RS28200 (GO602_28175)	-	6058457..6059374 (-)	918	WP_024916786.1	fimbrial protein	-
GO602_RS28205 (GO602_28180)	sutA	6059915..6060232 (-)	318	WP_024916787.1	transcriptional regulator SutA	-
GO602_RS28210 (GO602_28185)	-	6060310..6060735 (-)	426	WP_024916788.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
GO602_RS28215 (GO602_28190)	-	6060962..6062290 (-)	1329	WP_003109815.1	ammonium transporter	-
GO602_RS28220 (GO602_28195)	glnK	6062331..6062669 (-)	339	WP_003096476.1	P-II family nitrogen regulator	-
GO602_RS28225 (GO602_28200)	-	6063109..6063369 (+)	261	WP_003096478.1	accessory factor UbiK family protein	-
GO602_RS28230 (GO602_28205)	comM	6063412..6064905 (+)	1494	WP_024916789.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
GO602_RS28235 (GO602_28210)	betT	6065030..6067015 (+)	1986	WP_024916790.1	choline BCCT transporter BetT	-
GO602_RS28240 (GO602_28215)	pchP	6067058..6068107 (-)	1050	WP_024916791.1	phosphorylcholine phosphatase	-
GO602_RS28245 (GO602_28220)	-	6068258..6069175 (-)	918	WP_024916792.1	LysR substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 53067.02 Da
• Isoelectric Point: 7.9241

>NTDB_id=353915 GO602_RS28230 WP_024916789.1 6063412..6064905(+) (comM) [Pseudomonas aeruginosa strain CMC-115]
MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGTALDGMECLGELALSGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL
LEIAGHLSGQAPLLPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSGPPGTGKTLLASRLPGLLPALDE
DEALEVAAIHSVASHVPLRHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFDRKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLRESTSLQPGHGE
TATAEVSERVGAARHRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLERIDAI
ERRHLAEALQYRATNCG

Nucleotide

• Length: 1494 bp

>NTDB_id=353915 GO602_RS28230 WP_024916789.1 6063412..6064905(+) (comM) [Pseudomonas aeruginosa strain CMC-115]
ATGTCCCTGGCGATTGTCCACAGCCGAGCCCAGGTCGGCGTCGAAGCGCCCTGTGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTCCCTTCGCTGACCCTGGTCGGCCTGCCGGAAACCGCGGTGCGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAATGCCGGTTTCGACTTCCCCGCGCGGCGCATCACTCTCAACCTCGCCCCCGCCGACCTGCCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCACTCGGCATCCTCGCCGCCAGCGGCCAGCTACCCGGCACCGCCCTCGACGGCATGGAGTGCCT
CGGCGAACTGGCCCTGTCCGGTGCGATCCGGCCAGTCCGAGGCGTATTGCCGGCCGCGCTGGCGGCGCGCGACGCAAGGC
GCGTTCTGGTGGTACCGAAGGAAAATGCCGAAGAGGCCAGCCTGGCCAGCGGGCTGACGGTGTTCGCCGTGGACCACCTG
CTGGAAATCGCCGGACACCTCTCCGGCCAGGCCCCGCTGCTGCCCTACCAGGCCCGCGGCCTGCTCCGCGCGCCCTTCCC
CTATCCAGACCTGGCCGAGGTCCAGGGCCAGGCCGCCGCCAAGCGCGCCCTGCTGGTGGCCGCCGCCGGCGCACACAACC
TGTTGCTCAGCGGCCCGCCGGGCACCGGCAAGACCCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGGCGCTCGACGAG
GACGAGGCCCTGGAGGTCGCGGCGATCCATTCGGTGGCCAGCCACGTCCCCCTCAGGCACTGGCCGCAGCGTCCGTTCCG
CCAGCCGCACCATTCCGCCTCCGCGCCGGCCCTGGTCGGCGGCGGCAGCCGCCCGCAGCCAGGCGAGATCACCCTGGCAC
ACCAGGGCGTGCTGTTCCTCGACGAACTGCCGGAATTCGACCGCAAGGTCCTGGAAGTCCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATTGCCCGGGCCAACGGCCGGGTACGTTTCCCGGCGCGCTTCCAACTGGTGGCGGCGATGAATCCCTG
TCCCTGCGGTTACCTCGGCGATCCCAGCGGTCGCTGCCGCTGCACCCCGGAGCAGGTCCAGCGCTACCGGGGCAAGCTGT
CCGGGCCGCTGCTCGACCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCAGGACACGGCGAA
ACCGCTACCGCCGAGGTCAGCGAACGGGTCGGCGCCGCACGGCACCGGCAACTGGCCCGCCAGGGCTGCGCCAATGCCCA
TCTCGATCTCCAGGCGATGCACCGCAATTGTGCGCTCGCCGAAGCGGACCGTCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTGGCCCGGACGCTGGCCGACCTGGAGCGCATCGATGCCATC
GAACGCCGGCACCTGGCGGAAGCCCTGCAATATCGGGCGACGAACTGCGGCTGA

Domains

Predicted by InterProScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-492)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	56.627	100	0.567
comM	Haemophilus influenzae Rd KW20	55.467	100	0.561
comM	Vibrio cholerae O1 biovar El Tor strain E7946	55.823	100	0.559
comM	Vibrio cholerae strain A1552	55.823	100	0.559
comM	Glaesserella parasuis strain SC1401	54.473	100	0.551
comM	Acinetobacter baylyi ADP1	53.939	99.598	0.537
comM	Legionella pneumophila str. Paris	49.703	100	0.505
comM	Legionella pneumophila strain ERS1305867	49.703	100	0.505
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.776	100	0.469
comM	Helicobacter pylori 26695	39.078	100	0.392