Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   E3C75_RS09800 Genome accession   NZ_CP038020
Coordinates   1872021..1873106 (-) Length   361 a.a.
NCBI ID   WP_084828981.1    Uniprot ID   A0A0E2Q0D9
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1867021..1878106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS09770 - 1867385..1868200 (-) 816 WP_024010001.1 Cof-type HAD-IIB family hydrolase -
  E3C75_RS09775 - 1868193..1868987 (-) 795 WP_011681412.1 HAD family hydrolase -
  E3C75_RS09780 - 1869172..1869549 (+) 378 WP_011681413.1 GntR family transcriptional regulator -
  E3C75_RS09785 - 1869554..1870252 (+) 699 WP_011226301.1 ABC transporter ATP-binding protein -
  E3C75_RS09790 - 1870264..1871049 (+) 786 WP_011681414.1 hypothetical protein -
  E3C75_RS09795 amiF 1871099..1872028 (-) 930 WP_082245810.1 ATP-binding cassette domain-containing protein Regulator
  E3C75_RS09800 amiE 1872021..1873106 (-) 1086 WP_084828981.1 ABC transporter ATP-binding protein Regulator
  E3C75_RS09805 amiD 1873116..1874042 (-) 927 WP_084828982.1 oligopeptide ABC transporter permease OppC Regulator
  E3C75_RS09810 amiC 1874042..1875535 (-) 1494 WP_064355564.1 ABC transporter permease Regulator
  E3C75_RS09815 amiA3 1875596..1877569 (-) 1974 WP_111679665.1 peptide ABC transporter substrate-binding protein Regulator
  E3C75_RS09820 - 1877805..1877995 (-) 191 Protein_1895 IS3 family transposase -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39806.59 Da        Isoelectric Point: 4.8014

>NTDB_id=351427 E3C75_RS09800 WP_084828981.1 1872021..1873106(-) (amiE) [Streptococcus thermophilus strain ATCC 19258]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLAGDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=351427 E3C75_RS09800 WP_084828981.1 1872021..1873106(-) (amiE) [Streptococcus thermophilus strain ATCC 19258]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGGAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGGTGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E2Q0D9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus thermophilus LMG 18311

99.723

100

0.997

  amiE Streptococcus thermophilus LMD-9

99.723

100

0.997

  amiE Streptococcus salivarius strain HSISS4

96.676

100

0.967

  oppD Streptococcus mutans UA159

54.441

96.676

0.526


Multiple sequence alignment