Detailed information NTG0351428

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: E3C75_RS09805
• Genome accession: NZ_CP038020
• Coordinates: 1873116..1874042 (-)
• Length: 308 a.a.
• NCBI ID: WP_084828982.1
• Uniprot ID: A0A0E2Q2N6
• Organism: Streptococcus thermophilus strain ATCC 19258
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1868116..1879042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3C75_RS09775	-	1868193..1868987 (-)	795	WP_011681412.1	HAD family hydrolase	-
E3C75_RS09780	-	1869172..1869549 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
E3C75_RS09785	-	1869554..1870252 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
E3C75_RS09790	-	1870264..1871049 (+)	786	WP_011681414.1	hypothetical protein	-
E3C75_RS09795	amiF	1871099..1872028 (-)	930	WP_082245810.1	ATP-binding cassette domain-containing protein	Regulator
E3C75_RS09800	amiE	1872021..1873106 (-)	1086	WP_084828981.1	ABC transporter ATP-binding protein	Regulator
E3C75_RS09805	amiD	1873116..1874042 (-)	927	WP_084828982.1	oligopeptide ABC transporter permease OppC	Regulator
E3C75_RS09810	amiC	1874042..1875535 (-)	1494	WP_064355564.1	ABC transporter permease	Regulator
E3C75_RS09815	amiA3	1875596..1877569 (-)	1974	WP_111679665.1	peptide ABC transporter substrate-binding protein	Regulator
E3C75_RS09820	-	1877805..1877995 (-)	191	Protein_1895	IS3 family transposase	-
E3C75_RS12175	-	1877989..1878390 (-)	402	Protein_1896	ABC transporter ATP-binding protein	-
E3C75_RS12180	-	1878385..1878745 (-)	361	Protein_1897	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34664.83 Da
• Isoelectric Point: 9.7054

>NTDB_id=351428 E3C75_RS09805 WP_084828982.1 1873116..1874042(-) (amiD) [Streptococcus thermophilus strain ATCC 19258]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIIGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=351428 E3C75_RS09805 WP_084828982.1 1873116..1874042(-) (amiD) [Streptococcus thermophilus strain ATCC 19258]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAATGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCTCTCTTTATTA
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

3D structure

• AlphaFold DB: A0A0E2Q2N6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.026	100	0.99
amiD	Streptococcus thermophilus LMD-9	99.026	100	0.99
amiD	Streptococcus salivarius strain HSISS4	96.104	100	0.961