Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EXW55_RS24405 | Genome accession | NZ_CP036121 |
| Coordinates | 4727258..4727839 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049163.1 | Uniprot ID | A0A366GQ86 |
| Organism | Bacillus mycoides strain JAS635 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4722258..4732839
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW55_RS24370 (EXW55_24805) | - | 4723241..4723447 (+) | 207 | WP_000216167.1 | DUF1657 domain-containing protein | - |
| EXW55_RS24375 (EXW55_24810) | - | 4723554..4724042 (+) | 489 | WP_040963136.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| EXW55_RS24380 (EXW55_24815) | spoVAC | 4724071..4724547 (+) | 477 | WP_002034730.1 | stage V sporulation protein AC | - |
| EXW55_RS24385 (EXW55_24820) | spoVAD | 4724548..4725564 (+) | 1017 | WP_000938981.1 | stage V sporulation protein AD | - |
| EXW55_RS24390 (EXW55_24825) | spoVAE | 4725561..4725911 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| EXW55_RS24395 (EXW55_24830) | - | 4725921..4726127 (+) | 207 | WP_002034728.1 | DUF1657 domain-containing protein | - |
| EXW55_RS24400 (EXW55_24835) | - | 4726148..4727017 (+) | 870 | WP_002016080.1 | DUF421 domain-containing protein | - |
| EXW55_RS24405 (EXW55_24840) | clpP | 4727258..4727839 (+) | 582 | WP_001049163.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| EXW55_RS24410 (EXW55_24845) | - | 4728168..4728416 (-) | 249 | WP_215560076.1 | HPr family phosphocarrier protein | - |
| EXW55_RS24415 (EXW55_24850) | whiA | 4728440..4729390 (-) | 951 | WP_002016082.1 | DNA-binding protein WhiA | - |
| EXW55_RS24420 (EXW55_24855) | - | 4729479..4730432 (-) | 954 | WP_002016083.1 | YvcK family protein | - |
| EXW55_RS24425 (EXW55_24860) | rapZ | 4730436..4731317 (-) | 882 | WP_002016084.1 | RNase adapter RapZ | - |
| EXW55_RS24430 (EXW55_24865) | - | 4731338..4731796 (-) | 459 | WP_002124062.1 | 8-oxo-dGTP diphosphatase | - |
| EXW55_RS24435 (EXW55_24870) | - | 4732012..4732818 (-) | 807 | WP_061673727.1 | DUF368 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21447.68 Da Isoelectric Point: 5.0423
>NTDB_id=346991 EXW55_RS24405 WP_001049163.1 4727258..4727839(+) (clpP) [Bacillus mycoides strain JAS635]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=346991 EXW55_RS24405 WP_001049163.1 4727258..4727839(+) (clpP) [Bacillus mycoides strain JAS635]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAGGA
TCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATTTACATCAACAGCCCTGGTGGTTCTATCACAGCTGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTACGCACTTCCAAACAGTGAAGTTATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAATTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAGGA
TCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATTTACATCAACAGCCCTGGTGGTTCTATCACAGCTGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTACGCACTTCCAAACAGTGAAGTTATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAATTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAATCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |