Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EXW48_RS26575 | Genome accession | NZ_CP036101 |
| Coordinates | 5183742..5184323 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049163.1 | Uniprot ID | A0A366GQ86 |
| Organism | Bacillus wiedmannii strain JAS28/2 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5178742..5189323
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW48_RS26535 (EXW48_26945) | - | 5179179..5179532 (-) | 354 | WP_000734941.1 | YxeA family protein | - |
| EXW48_RS26540 (EXW48_26950) | - | 5179738..5179944 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| EXW48_RS26545 (EXW48_26955) | - | 5180038..5180523 (+) | 486 | WP_046955592.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| EXW48_RS26550 (EXW48_26960) | spoVAC | 5180553..5181029 (+) | 477 | WP_000095399.1 | stage V sporulation protein AC | - |
| EXW48_RS26555 (EXW48_26965) | spoVAD | 5181030..5182046 (+) | 1017 | WP_098146318.1 | stage V sporulation protein AD | - |
| EXW48_RS26560 (EXW48_26970) | spoVAE | 5182043..5182393 (+) | 351 | WP_000575918.1 | stage V sporulation protein AE | - |
| EXW48_RS26565 (EXW48_26975) | - | 5182405..5182611 (+) | 207 | WP_000215899.1 | DUF1657 domain-containing protein | - |
| EXW48_RS26570 (EXW48_26980) | - | 5182632..5183501 (+) | 870 | WP_097889568.1 | DUF421 domain-containing protein | - |
| EXW48_RS26575 (EXW48_26985) | clpP | 5183742..5184323 (+) | 582 | WP_001049163.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| EXW48_RS26580 (EXW48_26995) | - | 5184841..5185089 (-) | 249 | WP_000250305.1 | HPr family phosphocarrier protein | - |
| EXW48_RS26585 (EXW48_27000) | whiA | 5185113..5186063 (-) | 951 | WP_000006567.1 | DNA-binding protein WhiA | - |
| EXW48_RS26590 (EXW48_27005) | - | 5186153..5187106 (-) | 954 | WP_215562371.1 | YvcK family protein | - |
| EXW48_RS26595 (EXW48_27010) | rapZ | 5187110..5187991 (-) | 882 | WP_000138461.1 | RNase adapter RapZ | - |
| EXW48_RS26600 (EXW48_27015) | - | 5188012..5188470 (-) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21447.68 Da Isoelectric Point: 5.0423
>NTDB_id=346799 EXW48_RS26575 WP_001049163.1 5183742..5184323(+) (clpP) [Bacillus wiedmannii strain JAS28/2]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=346799 EXW48_RS26575 WP_001049163.1 5183742..5184323(+) (clpP) [Bacillus wiedmannii strain JAS28/2]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAATAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAATTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCTGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAATAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAATTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCTGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAATCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |