Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EXW54_RS13850 | Genome accession | NZ_CP036094 |
| Coordinates | 2768703..2769284 (-) | Length | 193 a.a. |
| NCBI ID | WP_000991620.1 | Uniprot ID | A0A9W5QUF9 |
| Organism | Bacillus toyonensis strain JAS22/1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2763703..2774284
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW54_RS13825 (EXW54_14185) | - | 2764920..2765096 (-) | 177 | WP_001213777.1 | hypothetical protein | - |
| EXW54_RS13830 (EXW54_14190) | - | 2765308..2765544 (+) | 237 | WP_000283217.1 | hypothetical protein | - |
| EXW54_RS13835 (EXW54_14195) | - | 2765595..2766431 (-) | 837 | WP_001084772.1 | proline/glycine betaine ABC transporter permease | - |
| EXW54_RS13840 (EXW54_14200) | - | 2766424..2767629 (-) | 1206 | WP_000370617.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| EXW54_RS13845 (EXW54_14205) | - | 2767801..2768658 (+) | 858 | WP_001227651.1 | glycine betaine ABC transporter substrate-binding protein | - |
| EXW54_RS13850 (EXW54_14210) | clpP | 2768703..2769284 (-) | 582 | WP_000991620.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| EXW54_RS13855 (EXW54_14215) | - | 2769306..2769992 (-) | 687 | WP_000337532.1 | RNA polymerase subunit sigma-70 | - |
| EXW54_RS13860 (EXW54_14220) | - | 2770136..2770456 (+) | 321 | WP_001125383.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| EXW54_RS13865 (EXW54_14225) | rpiA | 2770461..2771123 (+) | 663 | WP_001050008.1 | ribose 5-phosphate isomerase A | - |
| EXW54_RS13870 (EXW54_14230) | - | 2771238..2771672 (+) | 435 | WP_001190886.1 | GNAT family N-acetyltransferase | - |
| EXW54_RS13875 (EXW54_14235) | exsF | 2772323..2772826 (+) | 504 | WP_000953228.1 | exosporium protein ExsF | - |
| EXW54_RS13880 (EXW54_14240) | - | 2773123..2773587 (+) | 465 | WP_000024958.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21266.48 Da Isoelectric Point: 4.9174
>NTDB_id=346682 EXW54_RS13850 WP_000991620.1 2768703..2769284(-) (clpP) [Bacillus toyonensis strain JAS22/1]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=346682 EXW54_RS13850 WP_000991620.1 2768703..2769284(-) (clpP) [Bacillus toyonensis strain JAS22/1]
ATGAATGCAATTCCATATGTAGTAGAGCAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGAATTATTATTATCGGTTCAGAAATTAACGATCAAGTAGCGAGTAGTGTTGTAGCTCAATTATTATTTCTAGAAGCGG
AAGATGCAGAGAAAGATATATATTTATACATTAATAGCCCAGGCGGATCAACGACAGCAGGTTTTGCAATATTAGATACA
ATGAACTTAATTAAACCAGACGTGCAAACACTTTGTATGGGATTTGCAGCATCATTTGGTGCGTTGTTACTCTTATCAGG
TGCAAAAGGAAAACGATTTGCATTGCCTAACAGTGAAATTATGATTCATCAACCGCTTGGTGGTGCGCAAGGGCAGGCAA
CTGAAATCGAAATAACAGCAAAAAGAATTTTAAAGCTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
CCGATTGAAAGGGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTAGAGCAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGAATTATTATTATCGGTTCAGAAATTAACGATCAAGTAGCGAGTAGTGTTGTAGCTCAATTATTATTTCTAGAAGCGG
AAGATGCAGAGAAAGATATATATTTATACATTAATAGCCCAGGCGGATCAACGACAGCAGGTTTTGCAATATTAGATACA
ATGAACTTAATTAAACCAGACGTGCAAACACTTTGTATGGGATTTGCAGCATCATTTGGTGCGTTGTTACTCTTATCAGG
TGCAAAAGGAAAACGATTTGCATTGCCTAACAGTGAAATTATGATTCATCAACCGCTTGGTGGTGCGCAAGGGCAGGCAA
CTGAAATCGAAATAACAGCAAAAAGAATTTTAAAGCTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
CCGATTGAAAGGGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
69.11 |
98.964 |
0.684 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.254 |
97.927 |
0.668 |
| clpP | Streptococcus thermophilus LMD-9 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pneumoniae Rx1 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pneumoniae D39 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pneumoniae TIGR4 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pneumoniae R6 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus thermophilus LMG 18311 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pyogenes JRS4 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pyogenes MGAS315 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus mutans UA159 |
54.497 |
97.927 |
0.534 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
53.439 |
97.927 |
0.523 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
51.323 |
97.927 |
0.503 |