Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW46_RS00980 Genome accession   NZ_CP036085
Coordinates   179605..180288 (-) Length   227 a.a.
NCBI ID   WP_002011351.1    Uniprot ID   R8DDT2
Organism   Bacillus mycoides strain JAS12/5     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 174605..185288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW46_RS00965 (EXW46_00960) pepF 174784..176610 (-) 1827 WP_060749443.1 oligoendopeptidase F Regulator
  EXW46_RS00970 (EXW46_00965) - 176661..177896 (-) 1236 WP_215576880.1 competence protein CoiA -
  EXW46_RS00975 (EXW46_00970) - 177988..179532 (-) 1545 WP_215576879.1 cardiolipin synthase -
  EXW46_RS00980 (EXW46_00975) mecA 179605..180288 (-) 684 WP_002011351.1 adaptor protein MecA Regulator
  EXW46_RS00985 (EXW46_00980) - 180725..181399 (+) 675 WP_002030376.1 TerC family protein -
  EXW46_RS00990 (EXW46_00985) spx 181450..181845 (-) 396 WP_002011348.1 transcriptional regulator Spx -
  EXW46_RS00995 (EXW46_00995) - 182426..182629 (+) 204 WP_000559981.1 hypothetical protein -
  EXW46_RS01000 (EXW46_01000) - 182660..184306 (-) 1647 WP_002140829.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27029.17 Da        Isoelectric Point: 4.0116

>NTDB_id=346561 EXW46_RS00980 WP_002011351.1 179605..180288(-) (mecA) [Bacillus mycoides strain JAS12/5]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=346561 EXW46_RS00980 WP_002011351.1 179605..180288(-) (mecA) [Bacillus mycoides strain JAS12/5]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGATATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB R8DDT2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546


Multiple sequence alignment