Detailed information NTG0346482

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: EXW45_RS14150
• Genome accession: NZ_CP036073
• Coordinates: 2785410..2785991 (-)
• Length: 193 a.a.
• NCBI ID: WP_097916871.1
• Uniprot ID: -
• Organism: Bacillus wiedmannii strain JAS08/1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2780410..2790991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW45_RS14120 (EXW45_14320)	-	2781039..2781518 (-)	480	WP_000106234.1	HIT family protein	-
EXW45_RS14125 (EXW45_14325)	-	2781631..2781798 (-)	168	WP_000509286.1	hypothetical protein	-
EXW45_RS14130 (EXW45_14330)	-	2782016..2782252 (+)	237	WP_141542913.1	hypothetical protein	-
EXW45_RS14135 (EXW45_14335)	-	2782302..2783138 (-)	837	WP_046954106.1	proline/glycine betaine ABC transporter permease	-
EXW45_RS14140 (EXW45_14340)	-	2783131..2784336 (-)	1206	WP_046954107.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
EXW45_RS14145 (EXW45_14345)	-	2784508..2785365 (+)	858	WP_048547352.1	glycine betaine ABC transporter substrate-binding protein	-
EXW45_RS14150 (EXW45_14350)	clpP	2785410..2785991 (-)	582	WP_097916871.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
EXW45_RS14155 (EXW45_14355)	-	2786013..2786699 (-)	687	WP_149294278.1	RNA polymerase subunit sigma-70	-
EXW45_RS14160 (EXW45_14360)	-	2786842..2787162 (+)	321	WP_046954108.1	2Fe-2S iron-sulfur cluster-binding protein	-
EXW45_RS14165 (EXW45_14365)	rpiA	2787167..2787829 (+)	663	WP_097917248.1	ribose 5-phosphate isomerase A	-
EXW45_RS14170 (EXW45_14370)	-	2787936..2788373 (+)	438	WP_097916867.1	GNAT family N-acetyltransferase	-
EXW45_RS14175 (EXW45_14375)	-	2788777..2789748 (+)	972	WP_097916865.1	alpha/beta hydrolase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21289.52 Da
• Isoelectric Point: 4.9215

>NTDB_id=346482 EXW45_RS14150 WP_097916871.1 2785410..2785991(-) (clpP) [Bacillus wiedmannii strain JAS08/1]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKRDINKMIAEKTGQ
SIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=346482 EXW45_RS14150 WP_097916871.1 2785410..2785991(-) (clpP) [Bacillus wiedmannii strain JAS08/1]
ATGAATACAATTCCATATGTTGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGAATTATTATTATCGGTTCAGAAATTAACGACCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCGG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCAGGCGGATCAACGACAGCTGGTTTTGCCATATTAGATACG
ATGAATCTCATTAAACCAGATGTACAAACGCTATGCATGGGATTTGCAGCATCATTTGGTGCATTGTTATTATTATCAGG
TGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCACTTGGTGGTGCGCAAGGCCAGGCAA
CAGAAATTGAAATAACAGCGAAAAGAATACTAAAGTTAAAGCGTGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
TCGATTGAAAGAGTAGCACATGATACAGAAAGAGACTATTTTATGACTGCTGAAGAAGCGAAAGAATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.725	97.927	0.663
clpP	Streptococcus pneumoniae Rx1	56.25	99.482	0.56
clpP	Streptococcus pneumoniae D39	56.25	99.482	0.56
clpP	Streptococcus pneumoniae R6	56.25	99.482	0.56
clpP	Streptococcus pneumoniae TIGR4	56.25	99.482	0.56
clpP	Streptococcus thermophilus LMG 18311	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMD-9	55.208	99.482	0.549
clpP	Streptococcus pyogenes JRS4	55.026	97.927	0.539
clpP	Streptococcus pyogenes MGAS315	55.026	97.927	0.539
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	53.439	97.927	0.523
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.323	97.927	0.503