Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EXW62_RS12155 Genome accession   NZ_CP036034
Coordinates   2422576..2424450 (+) Length   624 a.a.
NCBI ID   WP_215556455.1    Uniprot ID   -
Organism   Bacillus mycoides strain BPN57/2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2417576..2429450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW62_RS12140 (EXW62_12395) - 2417703..2418818 (+) 1116 WP_215556452.1 FAD-binding oxidoreductase -
  EXW62_RS12145 (EXW62_12400) pssA 2419263..2419754 (-) 492 WP_215556453.1 CDP-diacylglycerol--serine O-phosphatidyltransferase -
  EXW62_RS12150 (EXW62_12405) - 2420333..2422579 (+) 2247 WP_215556454.1 ABC transporter ATP-binding protein -
  EXW62_RS12155 (EXW62_12410) rcrQ 2422576..2424450 (+) 1875 WP_215556455.1 ABC transporter ATP-binding protein Regulator
  EXW62_RS12160 (EXW62_12415) - 2424733..2424927 (+) 195 WP_215556456.1 hypothetical protein -
  EXW62_RS12165 (EXW62_12420) - 2425323..2427041 (+) 1719 WP_215556457.1 thiamine pyrophosphate-binding protein -
  EXW62_RS12170 (EXW62_12425) - 2427133..2428563 (+) 1431 WP_215556458.1 PQQ-dependent sugar dehydrogenase -
  EXW62_RS12175 (EXW62_12430) - 2428741..2429313 (+) 573 WP_215556459.1 hypothetical protein -

Sequence

Protein


Download         Length: 624 a.a.        Molecular weight: 68957.86 Da        Isoelectric Point: 6.2673

>NTDB_id=346080 EXW62_RS12155 WP_215556455.1 2422576..2424450(+) (rcrQ) [Bacillus mycoides strain BPN57/2]
MSDRKIENSRQGGPGPGGGGPMGGGMRKIEKAKNFKGTMNKLLQYLKPYKLSILVVILFAIGSAAFTIVGPKILGNATTK
LFEGLVSKVSGAPGAAIDFTYIGNIVILLLGLYLLSTAFGIIQGYIISGVAQKVSYNFRKEIDEKINRMPLNYFDKTTHG
EVLSRITNDVDTVSQTLNQSMSQIITSVITIIGVLIMMLSISWQMTLVALLILPVSMILIMAVVKRSQKYFKSQQEYLGH
VNGQVEEIYSGHNIVKAFNKEEEEVKKFEKVNDTLYHSAWKSQFLSGMMMPIMTFIGNIGYVAVSILGGWLAVKRTIAVG
DILAFVQYVRSFTQPIAQVAQIANVLQSTAAAAERVFEFLEEEEEVPEAENPVKLQKVQGEVTFQDVQFGYNPDKIIINN
FSANIKPGQKVAIVGPTGAGKTTIVKLLMRFYDINSGAICIDGHDIKDFTREDLRSMFGMVLQDTWLFNGPIMENIRYGR
LDATDEEVIEAAKAAHVHSFVKTLPNKYQMELNEEASNVSQGQKQLLTIARALLADPKILILDEATSSIDTRTEVLIQKA
MENLMEGRTSFIIAHRLSTIRDADLILVMKDGDIVEQGNHEELLKADGFYASLYNSQFEGADAS

Nucleotide


Download         Length: 1875 bp        

>NTDB_id=346080 EXW62_RS12155 WP_215556455.1 2422576..2424450(+) (rcrQ) [Bacillus mycoides strain BPN57/2]
ATGAGTGATAGAAAAATAGAAAATAGTAGACAAGGCGGCCCTGGTCCTGGTGGTGGCGGTCCTATGGGCGGCGGCATGAG
AAAGATTGAGAAGGCAAAAAACTTCAAAGGAACGATGAATAAACTCCTTCAATACTTGAAGCCCTATAAATTATCAATCT
TAGTCGTTATCCTTTTCGCAATCGGTAGTGCAGCCTTTACAATCGTTGGTCCAAAAATTTTAGGAAATGCGACAACAAAA
CTTTTCGAAGGACTCGTAAGCAAAGTATCAGGAGCACCCGGTGCGGCCATTGACTTTACCTATATCGGAAACATTGTTAT
TTTACTCCTTGGATTATATTTACTGAGCACTGCGTTTGGTATTATCCAGGGGTACATTATTTCTGGAGTAGCTCAAAAAG
TATCTTATAACTTCAGAAAAGAAATCGACGAAAAAATTAACCGTATGCCACTGAATTACTTTGATAAAACAACGCACGGT
GAAGTATTATCGAGAATTACAAATGACGTAGATACGGTGAGCCAAACGTTAAACCAAAGTATGTCGCAAATCATCACATC
CGTTATTACAATCATCGGTGTACTTATCATGATGTTATCAATTAGCTGGCAAATGACATTAGTGGCGCTTTTAATATTGC
CAGTATCGATGATTCTCATCATGGCAGTCGTAAAACGATCACAAAAATACTTCAAATCCCAGCAAGAATATTTAGGACAC
GTAAACGGTCAGGTCGAAGAAATTTATAGTGGTCACAATATCGTAAAAGCCTTTAACAAAGAAGAAGAAGAAGTAAAGAA
ATTCGAAAAGGTAAATGATACCCTTTACCACTCCGCTTGGAAATCTCAATTTTTATCTGGAATGATGATGCCGATTATGA
CATTTATCGGTAATATCGGTTACGTCGCTGTATCTATTTTAGGCGGATGGCTTGCGGTAAAGAGAACCATTGCTGTTGGA
GATATTTTAGCCTTCGTACAATATGTAAGAAGCTTTACACAACCAATCGCTCAAGTAGCGCAAATCGCGAACGTACTTCA
ATCCACTGCAGCTGCTGCAGAAAGAGTTTTCGAATTTTTAGAAGAAGAAGAGGAAGTGCCAGAAGCAGAAAATCCAGTGA
AACTGCAAAAAGTTCAAGGAGAAGTTACCTTCCAAGATGTTCAATTTGGATACAATCCAGATAAGATCATCATCAATAAT
TTCTCAGCTAACATTAAGCCTGGACAAAAAGTAGCAATCGTCGGACCAACCGGAGCTGGTAAAACAACGATCGTAAAACT
GTTAATGCGTTTCTATGACATAAACAGCGGTGCGATATGTATAGATGGTCACGATATAAAAGACTTCACGCGAGAAGACC
TACGCAGCATGTTTGGTATGGTACTGCAAGACACTTGGCTATTTAACGGACCAATCATGGAAAATATCCGTTACGGTAGA
CTCGATGCTACAGACGAAGAAGTAATTGAAGCAGCAAAAGCAGCTCACGTTCACAGCTTCGTAAAAACATTACCAAATAA
ATATCAAATGGAACTAAACGAAGAAGCAAGCAATGTATCCCAAGGACAAAAGCAACTACTAACAATTGCCCGCGCCCTTC
TAGCGGATCCGAAAATATTAATACTCGATGAAGCAACAAGCTCCATTGACACTCGTACAGAAGTACTGATTCAAAAAGCG
ATGGAAAACCTTATGGAAGGTAGAACAAGCTTCATTATCGCTCATAGATTATCAACAATACGTGATGCAGATTTAATCCT
TGTCATGAAAGACGGGGATATTGTAGAACAAGGTAATCATGAAGAGTTATTGAAAGCTGATGGTTTCTATGCTTCGCTTT
ATAATAGTCAGTTTGAAGGTGCGGATGCTTCTTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-335)

ABC transporter (ABC_tran)

(399-547)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.458

93.429

0.481

Multiple sequence alignment