Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EXW26_RS25170 | Genome accession | NZ_CP035984 |
| Coordinates | 4887885..4888466 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049163.1 | Uniprot ID | A0A366GQ86 |
| Organism | Bacillus mycoides strain BPN211 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4882885..4893466
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW26_RS25135 (EXW26_25675) | - | 4883868..4884074 (+) | 207 | WP_000216167.1 | DUF1657 domain-containing protein | - |
| EXW26_RS25140 (EXW26_25680) | - | 4884181..4884669 (+) | 489 | WP_002034731.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| EXW26_RS25145 (EXW26_25685) | spoVAC | 4884698..4885174 (+) | 477 | WP_002034730.1 | stage V sporulation protein AC | - |
| EXW26_RS25150 (EXW26_25690) | spoVAD | 4885175..4886191 (+) | 1017 | WP_215551440.1 | stage V sporulation protein AD | - |
| EXW26_RS25155 (EXW26_25695) | spoVAE | 4886188..4886538 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| EXW26_RS25160 (EXW26_25700) | - | 4886548..4886754 (+) | 207 | WP_002191146.1 | DUF1657 domain-containing protein | - |
| EXW26_RS25165 (EXW26_25705) | - | 4886775..4887644 (+) | 870 | WP_002016080.1 | DUF421 domain-containing protein | - |
| EXW26_RS25170 (EXW26_25710) | clpP | 4887885..4888466 (+) | 582 | WP_001049163.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| EXW26_RS25175 (EXW26_25720) | - | 4889070..4889318 (-) | 249 | WP_002016081.1 | HPr family phosphocarrier protein | - |
| EXW26_RS25180 (EXW26_25725) | whiA | 4889342..4890292 (-) | 951 | WP_002016082.1 | DNA-binding protein WhiA | - |
| EXW26_RS25185 (EXW26_25730) | yvcK | 4890381..4891334 (-) | 954 | WP_002016083.1 | YvcK family protein | - |
| EXW26_RS25190 (EXW26_25735) | rapZ | 4891338..4892219 (-) | 882 | WP_002016084.1 | RNase adapter RapZ | - |
| EXW26_RS25195 (EXW26_25740) | - | 4892240..4892698 (-) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21447.68 Da Isoelectric Point: 5.0423
>NTDB_id=345536 EXW26_RS25170 WP_001049163.1 4887885..4888466(+) (clpP) [Bacillus mycoides strain BPN211]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=345536 EXW26_RS25170 WP_001049163.1 4887885..4888466(+) (clpP) [Bacillus mycoides strain BPN211]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
TCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATTTACATCAACAGCCCTGGTGGTTCTATCACAGCTGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATTGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTACGCACTTCCAAACAGTGAAGTTATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAATTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
TCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATTTACATCAACAGCCCTGGTGGTTCTATCACAGCTGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATTGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTACGCACTTCCAAACAGTGAAGTTATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAATTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAATCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |