Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EXW35_RS25475 | Genome accession | NZ_CP035965 |
| Coordinates | 4933678..4934259 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049156.1 | Uniprot ID | J8DR96 |
| Organism | Bacillus mycoides strain BPN09/1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4928678..4939259
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW35_RS25440 (EXW35_25955) | - | 4929661..4929867 (+) | 207 | WP_000216167.1 | DUF1657 domain-containing protein | - |
| EXW35_RS25445 (EXW35_25960) | - | 4929974..4930462 (+) | 489 | WP_002167400.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| EXW35_RS25450 (EXW35_25965) | spoVAC | 4930491..4930967 (+) | 477 | WP_002129887.1 | stage V sporulation protein AC | - |
| EXW35_RS25455 (EXW35_25970) | spoVAD | 4930968..4931984 (+) | 1017 | WP_078213831.1 | stage V sporulation protein AD | - |
| EXW35_RS25460 (EXW35_25975) | spoVAE | 4931981..4932331 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| EXW35_RS25465 (EXW35_25980) | - | 4932341..4932547 (+) | 207 | WP_002167398.1 | DUF1657 domain-containing protein | - |
| EXW35_RS25470 (EXW35_25985) | - | 4932568..4933437 (+) | 870 | WP_002016080.1 | DUF421 domain-containing protein | - |
| EXW35_RS25475 (EXW35_25990) | clpP | 4933678..4934259 (+) | 582 | WP_001049156.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| EXW35_RS25480 (EXW35_25995) | - | 4934510..4934758 (-) | 249 | WP_002016081.1 | HPr family phosphocarrier protein | - |
| EXW35_RS25485 (EXW35_26000) | whiA | 4934782..4935732 (-) | 951 | WP_002016082.1 | DNA-binding protein WhiA | - |
| EXW35_RS25490 (EXW35_26005) | - | 4935821..4936774 (-) | 954 | WP_002016083.1 | YvcK family protein | - |
| EXW35_RS25495 (EXW35_26010) | rapZ | 4936778..4937659 (-) | 882 | WP_002016084.1 | RNase adapter RapZ | - |
| EXW35_RS25500 (EXW35_26015) | - | 4937680..4938138 (-) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
| EXW35_RS25505 (EXW35_26020) | - | 4938354..4939160 (-) | 807 | WP_002016085.1 | DUF368 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21431.68 Da Isoelectric Point: 5.0423
>NTDB_id=345388 EXW35_RS25475 WP_001049156.1 4933678..4934259(+) (clpP) [Bacillus mycoides strain BPN09/1]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=345388 EXW35_RS25475 WP_001049156.1 4933678..4934259(+) (clpP) [Bacillus mycoides strain BPN09/1]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAGGA
TCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATTTACATCAACAGCCCTGGTGGTTCTATCACAGCTGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTTCGCTCTTCCTAACAGTGAAGTAATGATTCACCAACCACTTGGCGGTGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAATTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGATCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAGGA
TCGCATCATTATGCTTGGTAGCGCAATTGATGACAATGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATTTACATCAACAGCCCTGGTGGTTCTATCACAGCTGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTTCGCTCTTCCTAACAGTGAAGTAATGATTCACCAACCACTTGGCGGTGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAATTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGATCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAATCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
89.583 |
99.482 |
0.891 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.553 |
97.409 |
0.658 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.938 |
99.482 |
0.606 |
| clpP | Streptococcus thermophilus LMD-9 |
60.938 |
99.482 |
0.606 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
59.375 |
99.482 |
0.591 |
| clpP | Streptococcus pneumoniae D39 |
57.812 |
99.482 |
0.575 |
| clpP | Streptococcus pneumoniae Rx1 |
57.812 |
99.482 |
0.575 |
| clpP | Streptococcus pneumoniae R6 |
57.812 |
99.482 |
0.575 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.812 |
99.482 |
0.575 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus mutans UA159 |
55.959 |
100 |
0.56 |
| clpP | Streptococcus pyogenes JRS4 |
56.25 |
99.482 |
0.56 |
| clpP | Streptococcus pyogenes MGAS315 |
56.25 |
99.482 |
0.56 |