Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EXW30_RS24565 | Genome accession | NZ_CP035962 |
| Coordinates | 4769793..4770374 (+) | Length | 193 a.a. |
| NCBI ID | WP_002159906.1 | Uniprot ID | J8FHM7 |
| Organism | Bacillus mycoides strain BPN07/3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4764793..4775374
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW30_RS24530 (EXW30_25010) | - | 4765774..4765980 (+) | 207 | WP_000216167.1 | DUF1657 domain-containing protein | - |
| EXW30_RS24535 (EXW30_25015) | - | 4766088..4766576 (+) | 489 | WP_002159909.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| EXW30_RS24540 (EXW30_25020) | spoVAC | 4766605..4767081 (+) | 477 | WP_002112810.1 | stage V sporulation protein AC | - |
| EXW30_RS24545 (EXW30_25025) | spoVAD | 4767082..4768098 (+) | 1017 | WP_078173399.1 | stage V sporulation protein AD | - |
| EXW30_RS24550 (EXW30_25030) | spoVAE | 4768095..4768445 (+) | 351 | WP_002112813.1 | stage V sporulation protein AE | - |
| EXW30_RS24555 (EXW30_25035) | - | 4768457..4768663 (+) | 207 | WP_016106600.1 | DUF1657 domain-containing protein | - |
| EXW30_RS24560 (EXW30_25040) | - | 4768684..4769553 (+) | 870 | WP_016106601.1 | DUF421 domain-containing protein | - |
| EXW30_RS24565 (EXW30_25045) | clpP | 4769793..4770374 (+) | 582 | WP_002159906.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| EXW30_RS24570 (EXW30_25050) | - | 4770790..4771038 (-) | 249 | WP_002144903.1 | HPr family phosphocarrier protein | - |
| EXW30_RS24575 (EXW30_25055) | whiA | 4771062..4772012 (-) | 951 | WP_002159905.1 | DNA-binding protein WhiA | - |
| EXW30_RS24580 (EXW30_25060) | - | 4772101..4773054 (-) | 954 | WP_002159904.1 | gluconeogenesis factor YvcK family protein | - |
| EXW30_RS24585 (EXW30_25065) | rapZ | 4773058..4773939 (-) | 882 | WP_002016084.1 | RNase adapter RapZ | - |
| EXW30_RS24590 (EXW30_25070) | - | 4773960..4774418 (-) | 459 | WP_002124062.1 | NUDIX hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21404.66 Da Isoelectric Point: 5.0423
>NTDB_id=345336 EXW30_RS24565 WP_002159906.1 4769793..4770374(+) (clpP) [Bacillus mycoides strain BPN07/3]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTSR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTSR
Nucleotide
Download Length: 582 bp
>NTDB_id=345336 EXW30_RS24565 WP_002159906.1 4769793..4770374(+) (clpP) [Bacillus mycoides strain BPN07/3]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAGGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTATATCAACAGCCCTGGTGGTTCTATCACAGCTGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTTCGCTCTTCCTAACAGTGAAGTAATGATTCACCAACCACTTGGCGGTGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGCATCCTATTCTTACGCGAAAAATTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAGTCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAGGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTATATCAACAGCCCTGGTGGTTCTATCACAGCTGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTTCGCTCTTCCTAACAGTGAAGTAATGATTCACCAACCACTTGGCGGTGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGCATCCTATTCTTACGCGAAAAATTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGCTTAATCGA
TAAGATCTTTACAAGTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.052 |
98.964 |
0.891 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.553 |
97.409 |
0.658 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
59.474 |
98.446 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
57.368 |
98.446 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
56.316 |
98.446 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
56.316 |
98.446 |
0.554 |
| clpP | Streptococcus mutans UA159 |
56.021 |
98.964 |
0.554 |